| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3267 |
|---|
| Symbol | |
|---|
| ID | 5735135 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 4130886 |
|---|
| End bp | 4132298 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641280413 |
|---|
| Product | ferredoxin--NADP(+) reductase |
|---|
| Protein accession | YP_001546032 |
|---|
| Protein GI | 159899785 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAACTG TGGGAACTGA AGCGCAGCCA TTACGGGTTG CGATCATTGG TTCTGGGCCA
TCGGCATTTT ATGCGGCGGA TCACTTGCTC AAACAAAGCG ATCTGGTTGT AGAAGTTGAT
ATGTTCGACC GTTTGCCAAC GCCATTTGGT TTGGTTCGCG GTGGGGTCGC TCCTGATCAT
CAGAAGATCA AGACCGTCAC CAAGGCCTTT AATTTGGTTG CCAAAAATCC TCGTTTTCGC
TTTTTTGGCT ATGTGGAATA TGGTAAAGAT CTGAGCCACG CCGATTTAGT TGAACACTAC
CATCAAATTT TATATGCCAC AGGTGCGCAA AGTGATCGCC ATATGGGGAT TCCTGGCGAG
GATCTGACTA ATAGTTTTCC GGCGACCGCC TTTGTGGCTT GGTACAACGG CCATCCCGAT
TATCGTCATC TGCAATTCGA TCTCTCGCAA GAGCGGGTGG CGGTAGTTGG GGTTGGCAAC
GTGGCAATTG ATGTAGCACG GATTTTGTGC CTCTCGCACG AAGAATTAGC GCGTACCGAC
ATCGCCGACC ATGCTTTGGA AGCACTCAGC AAAAGCAATA TTAAAGAAGT GTATTTGCTG
GGGCGACGTG GGCCAGCTCA AGCAGCCTTC ACCACTCCCG AAGTCAAAGA ATTGGGCGAG
CTGGAAGAAG CCGATGTGGT GGCGATTCCC AGCGAAGTTG CCCTCGACGA TGTGAGCCGC
GCCGATCTAG AGGCTGGTGG CGATAAAGCT GCTCAGAAGA AGGTCGAATT GCTGCAAGGC
TACGCTCAAC GTGCGCCCGA AGGCAAAAAA CGCCGCTTGA TTTTCCGCTT CTTGGTTAGC
CCAACCGAAG TTTTAGGCGA TAGCGATGGG CGGGTAGCAG GCTTGCGTTT GGCTAAAAAC
GAACTTTACG CCAGCGAATC GGGCAGCATC GCCTCACGCG CAACTGGCGA AACCGAAGAT
TTGCCCGTTG GCTTGGTTTT CCGTTCGGTT GGCTATCGTG GTTCACCATT GGTTGATGTA
CCATTCAATG AACGCTGGGG AACCTTCCTC AACCAAAAAG GCCGCATTAT CGACCCAACC
AGCCAACAGC CCAAAATTGG CGAATATACT GCTGGCTGGA TCAAGCGCGG CCCGAGTGGC
GTGATTGGCA CCAACAAGCC CGATGCAGTT GAAACTGTCC AATGTATGTT GGAAGATTTG
GCGACAGGGC AAGTGCTCAA TCCTAGCCAT GCCGAGCGCG AAAGCATTGA AAAATTGGTG
CAAGAACGCC AACCCAACTA TGTAACCTTT GCCGATTGGC AACACCTCGA CGAGATTGAG
GTTGCCAATG GCGCGGCTAC AGGTCGGCCA CGGGTCAAAT TCACCCGCAT CGAAGATATG
TTGGCTGCAC TTGGCAAAAA TGTAACTGCC TAA
|
|---|
| Protein sequence | MTTVGTEAQP LRVAIIGSGP SAFYAADHLL KQSDLVVEVD MFDRLPTPFG LVRGGVAPDH
QKIKTVTKAF NLVAKNPRFR FFGYVEYGKD LSHADLVEHY HQILYATGAQ SDRHMGIPGE
DLTNSFPATA FVAWYNGHPD YRHLQFDLSQ ERVAVVGVGN VAIDVARILC LSHEELARTD
IADHALEALS KSNIKEVYLL GRRGPAQAAF TTPEVKELGE LEEADVVAIP SEVALDDVSR
ADLEAGGDKA AQKKVELLQG YAQRAPEGKK RRLIFRFLVS PTEVLGDSDG RVAGLRLAKN
ELYASESGSI ASRATGETED LPVGLVFRSV GYRGSPLVDV PFNERWGTFL NQKGRIIDPT
SQQPKIGEYT AGWIKRGPSG VIGTNKPDAV ETVQCMLEDL ATGQVLNPSH AERESIEKLV
QERQPNYVTF ADWQHLDEIE VANGAATGRP RVKFTRIEDM LAALGKNVTA
|
|---|
| |