Gene Haur_3238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_3238 
Symbol 
ID5735106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp4100105 
End bp4100821 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content55% 
IMG OID641280384 
Producthypothetical protein 
Protein accessionYP_001546003 
Protein GI159899756 
COG category[S] Function unknown 
COG ID[COG0327] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.725411 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAAACC TCGCTGAACT TTCGACCTTC TTACAAACCA TCTTAGAGAC CGAGTATTTT 
CCAAGTGAAG AACGGGGTAC GATCTATATT TCGTCGGTGC GGCCTATTCG CCGCATGGGC
TTTGCGCTCG ATCCATGGCC AACCTTGCCA TCATGGCTTG AACACGAAGA TCTCGACGCG
ATCTTTTTAC ATCGCCCGCA ACAACTTGAT CGTGATACGG TGCCGCCAAC CCGTGGGGTG
CTCTATGCTG GCGCACCATT CGACGAGCGC TTGACGATTG GCTTTGTGCC ACGCATGGCT
GAAGTTTTGG GCTTGCGCGG GCGCTCACCT ATGGCCGATA AAAGTGGCCG TCCTTTGGGC
ATGGTCGGCG ATCTGCCCAA GCCTGTAACG ACTGCCGAAT GGCGACGACT TGTCATGGAT
ATGTATGGCG GGGTCGATGA GGTTTGGGAA AATAATGTTC AATCGATCCG TAAGGTTGCG
ATTGTCAACC AAATTACCCC AACCCTCGTG CAAGAGGCCG CAAATCGTGG CGCTCAGGCC
TTCCTCACGC CAATTCTGCG CGAATCAGCC CAAGCTAGCT GTCGCGCCAA CAATATGGCT
GCCTTCAGCA CTGGCATCAA ACGAGCTGAA CATTGGGGCT TACGCACCCT CGCAGGCATG
ATCCGCGAGC GCTGGGCGGG CGTGCGCACG GCGATTTTTG AAGATCGCGG CCAGTAA
 
Protein sequence
MPNLAELSTF LQTILETEYF PSEERGTIYI SSVRPIRRMG FALDPWPTLP SWLEHEDLDA 
IFLHRPQQLD RDTVPPTRGV LYAGAPFDER LTIGFVPRMA EVLGLRGRSP MADKSGRPLG
MVGDLPKPVT TAEWRRLVMD MYGGVDEVWE NNVQSIRKVA IVNQITPTLV QEAANRGAQA
FLTPILRESA QASCRANNMA AFSTGIKRAE HWGLRTLAGM IRERWAGVRT AIFEDRGQ