| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3219 |
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| Symbol | |
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| ID | 5735087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 4071225 |
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| End bp | 4073606 |
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| Gene Length | 2382 bp |
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| Protein Length | 793 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641280365 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001545984 |
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| Protein GI | 159899737 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACTGGC GCTCGTTTAT TCCACGGACA CTAGCCGATT CCCAATCTCG TCAACAGTTA
TTGATTGTCA TGCTCAAAAG CGTTGTTTGG ATCTTTACTC CCGTCCAAGT TATCTTGAGT
TTTACCTTGA CAACCACAAG CTGGCCACGC CTGTTGTTGC TGGCGATTGT CAACCTGCTT
TGTGCTGGAA TCTGGCTCTT AATCAAACGC AATAAGCTGG ATCTGGCGGG CAAGCTGTTT
GTTGGGTTGT TTTGGTTGTT ATTTACGGGT TTGATGCTGA GCACTGGTGG CATTAGCTCG
CCTTCGATTA TTGCCTACTT TTTCGTCATT TTTACCGCCA GCTTTTTGTT GGGAGAACTG
GCAAGTGTGA TTATCGGCTG TCTGAGTTTA GCGGCAACCT TTGTAGCCGT GCTCCTTGAG
CTGAATCAGC TTTTGCCCGC CTCGGTGATT GTTTATACCC CCGTTTCGCG TTGGCTCAGT
TACAGCTTTT ATCTTGGCAT TATGCTGATA TTTCAGATGG TCAGTGGGCG CTTGGTCTAT
AAGGCCATGC AAAAAGCCCA AGCCGAGTTA CACGAACGCC AACGCATCGA AGCTGAATTA
CGCCATTCTG AAGCCCAATA TCGTCTTTTG TTCGATACTA TTCCAATTGG CATTGGCATG
GCTAAACTCG ATGGTACAGT CATCGCCATC AACCCAGCTG GCAGCCAAAT GATGGGCTAT
AGCCATGCCG AATTGATGCA AATCAAACTC GAACAGTTAT ATGCCAATCC CGATCAACGG
GCTAGTTTAA TTCAGCAAGC CCAGCAAACT GGCAAGATTC GCGACCGCGA GATGGCTTTC
CGGCGCAACG ATGGCCAATT GGTTTGGGCG TTGGTCAATC TTGATCTTGG GTTAATTAAT
GGTGAGGCGG TGACGATTGC CACGCTGCGC GATAACACCA CTCAACGCGC AGCAGAACAA
GCCTTGCGCA CCAACGAAGC TCGTTTTCGG GCAATCTTTG AGCATGCAGC AATCGGAATT
GTCTTAATTG ATAATAATGG TGTGGTCTTT AGCGCCAACC CAACTGCTTG TATGTTGCTT
AATTTCAGTG AACATGAATT GCAACAACAA GCCTTTGTTA ATTTCACCCA TCCCGATGAT
CGCCAATTTG AAATGAGCTT AAATCAAGAA CTTCGCGCCG GATTATGTGA TTCGTATCAA
ATTGAGCAGC GCTTTATTCG CTCTGATGGT GGGATTGTTT GGGGCCGTTT GTGTGCCTCA
TTAGTCCAAG ATGCTGCTGA TCAACCTTTA TTTATGATTG CGATGATTGA AGATCTTAGC
TCGTATAAAG ATACCCAGGC CCAACTTGAC TTGCAAATGC AAACTCTGAC AGCGCTCTAC
TACAGCTCAC AACGCCTAAC AACCAAACTC AAAGTCGAGG AATTGGCCCG CGATGGGGCC
GATAGTTGTG TTAGCATTTT TGGCGCACAA CGGGCTTGGC TCACGCTCAA TCAGGCTGAT
CAGCTTAACT ATCACGAACA TAACCTAGAA CAACCCTTGC CCAGTGTTCA CATTGAGATT
GAATCGACTC AACCCATCAC CCGCGATGGC CCAACTCGAA CCATGGCCTT TCCGTTGGTC
AGCCATAATC ACACCTTTGG GATGCTCAAT TTGCAGAGCA ATCAGGCTGA TTTCTTTCAA
GCTGAGCGCA ACGATATGCT ACAAACCTAT GCCAGTCAGG TCGCCGCCGC CTTGGATAAC
GCGCTCATGT TCCAACATTT GCAACAAATC AACCGTGAAG TTACCAGCGC CTACGATATG
ACGATTGAGG GTTGGTCTCG CGCCTTAGAT TTGCGTGATC ACGAGACTGA AGGCCATACC
CAACGTGTTA CCTGGATGAC TGAACGGCTG GCCGCCGCAA TGGGCCAATT TAGCGCCGAA
GAGTTGATCC ATGTGCGACG AGGCGCTTTG CTCCACGATA TTGGAAAAAT GGGTGTGCCC
GATGCCATCT TGCACAAGCC TGGGCCGCTC AACGATGAAG AATGGGTGAT TATGCGGCGG
CATCCGGTCT ATGCGTATCA ACTGCTTGCG CCAATTGGCT ACTTGCAAGG CTCGCTGGAT
ATTCCGCATT ATCATCATGA ACGCTGGGAT GGGGGCGGCT ATCCCAAAGG CTTGCAGGCC
GAAGAAATTC CTTTGGCGGC GCGAGTATTT GCCGTAGTTG ATGTATGGGA TGCCTTGCGT
TCTGATCGAC CATATCGCAA AGGTTGGTCA GATCAGCGGA TTATGGACTA TTTGGCGGGT
GAGGCGGGCA AGCATTTTGA TCCATTAGTC GTTGAAGTAT TTTTGCAATT GCTCATGACC
ATGAGCATTG CCGAGGTGCG TAATCCAGTT AATGAAGCCT AA
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| Protein sequence | MHWRSFIPRT LADSQSRQQL LIVMLKSVVW IFTPVQVILS FTLTTTSWPR LLLLAIVNLL
CAGIWLLIKR NKLDLAGKLF VGLFWLLFTG LMLSTGGISS PSIIAYFFVI FTASFLLGEL
ASVIIGCLSL AATFVAVLLE LNQLLPASVI VYTPVSRWLS YSFYLGIMLI FQMVSGRLVY
KAMQKAQAEL HERQRIEAEL RHSEAQYRLL FDTIPIGIGM AKLDGTVIAI NPAGSQMMGY
SHAELMQIKL EQLYANPDQR ASLIQQAQQT GKIRDREMAF RRNDGQLVWA LVNLDLGLIN
GEAVTIATLR DNTTQRAAEQ ALRTNEARFR AIFEHAAIGI VLIDNNGVVF SANPTACMLL
NFSEHELQQQ AFVNFTHPDD RQFEMSLNQE LRAGLCDSYQ IEQRFIRSDG GIVWGRLCAS
LVQDAADQPL FMIAMIEDLS SYKDTQAQLD LQMQTLTALY YSSQRLTTKL KVEELARDGA
DSCVSIFGAQ RAWLTLNQAD QLNYHEHNLE QPLPSVHIEI ESTQPITRDG PTRTMAFPLV
SHNHTFGMLN LQSNQADFFQ AERNDMLQTY ASQVAAALDN ALMFQHLQQI NREVTSAYDM
TIEGWSRALD LRDHETEGHT QRVTWMTERL AAAMGQFSAE ELIHVRRGAL LHDIGKMGVP
DAILHKPGPL NDEEWVIMRR HPVYAYQLLA PIGYLQGSLD IPHYHHERWD GGGYPKGLQA
EEIPLAARVF AVVDVWDALR SDRPYRKGWS DQRIMDYLAG EAGKHFDPLV VEVFLQLLMT
MSIAEVRNPV NEA
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