Gene Haur_3215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_3215 
Symbol 
ID5735083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp4065301 
End bp4065825 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content52% 
IMG OID641280361 
ProductNADH-ubiquinone/plastoquinone oxidoreductase chain 6 
Protein accessionYP_001545980 
Protein GI159899733 
COG category[C] Energy production and conversion 
COG ID[COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACAT TTTTGTTTAT CACCACGGCC ATTGTGGCGG TGGGGGCAGC CTTGGCAATG 
GTGCTGAGCA GCAATGCAGT GCATAGTGCG CTGTTTTTGA TTTTGAATTT CTGCTCGGTT
GCCATTTTAT ATTTTTTGCT GCGTGCGCCG TTTCTCGGTG CTGTTCAAGT GACGGTTTAT
GCTGGCGCGA TTATGGTGCT GTTCCTATTC GTGATCATGC TGTTGGGCGC TGAAAATGCC
GAGCTTGGCG AGGAGAAAAT CGGCTGGCAA AAGCCGGCTG GCCTCGTCTT GGGTGTCGCA
TTATTGGCCG AGATTGGCTA TGTGGCCTAT CGTGGCACGA CATTAATCGA TGCTCCGGTG
GCCGATGCAA CCAACATTGG CGCTCCAACC ACGATCAGCG CCAAGCTTTT CAGCACCTAT
CTCTTGCCCT TTGAAGTGAT TTCAATTTTG CTCTTGATTG CAGTAGTCGG GACAGTTGTG
CTGACCCGTC GGCGGGTGGT TGCCCGTGAG GAGAGCCAAT CGTGA
 
Protein sequence
METFLFITTA IVAVGAALAM VLSSNAVHSA LFLILNFCSV AILYFLLRAP FLGAVQVTVY 
AGAIMVLFLF VIMLLGAENA ELGEEKIGWQ KPAGLVLGVA LLAEIGYVAY RGTTLIDAPV
ADATNIGAPT TISAKLFSTY LLPFEVISIL LLIAVVGTVV LTRRRVVARE ESQS