| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3156 |
|---|
| Symbol | |
|---|
| ID | 5735028 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 3984425 |
|---|
| End bp | 3985717 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641280299 |
|---|
| Product | aminotransferase class-III |
|---|
| Protein accession | YP_001545921 |
|---|
| Protein GI | 159899674 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0001] Glutamate-1-semialdehyde aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000277167 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGCAG CACAACTGCC CAAGGTCAGC GGCGAAGCCC TAAATCTCAC CAAATCGATG
GAATTGTTAG TCCAAGCCGA AGCGATTGTT CCAGGAACAA CCCAATCGTT GATGAAACGG
CCTGAGCAAT TTGCCTATGG TTCGTTTCCA GTTTTTATTG ATCATGGCGA TGGCGCGTTG
GTAACCGATG TTGATGGCAA TCAATATATC GATTTTATTT GTGGCTTGGG TGCAACCACC
TTGGGTCACA ACCATCTAGC AGTGGTCGAG GCAATTCGCA ATAACTTGGA TAAAGGGCTG
ATTCATTCGC TGCCCACCGA AGTTGAGCTA CGCGCAACTC AAGCATTGAT CGATATTATT
CCGAATGCTG AAATGGCTCG CTTCTTCAAA ACTGGGGCTG ATGCCACTTC GGCTGCTGTG
CGTTTGGCTC GCCACCTGAC CAAGCGCGAA CGGATTATCA CGGTCGGCTA CAATGGTTGG
CACGACCATT TTATGTATTA CACTCCTGGC GTGCCCGCAG TGCTCAGCCA ATACACCGAA
CAAGTATCGT TGATGGCTCC CCACGAAAAG CCCAACTTGA TCGCTGCCAT CAACAACCAT
GGCGATCAAT TGGCCGCCGT GTTGCTTTCA ATGCCCTACA AACACTGCTT GGATGCTGAG
TATTTGAACG AAGTTAAGGC TGCTTGTCAT GCAGTTGGCG CATTATTTGT GCTCGATGAA
GTGGTAACGG GCTTCCGCTT GGCGTTGGGT GGGGCGCAAG AATTCTATGG CGTTGATGCA
GATTTCGTCT GTCTCTCAAA GGGCATCGCC GCAGGTATGC CACTTTCTGC GATTACTGGA
CCCAAAAAGC ATCTCGAACG CTTATCCGAT TTGCAAGTTT CAACCACCTT TGGCGGCGAA
ATGCTCTCGC TGGAAGTTTG CTACGAAGTG ATTAACATCT ATCGCAACAC TAACTATTTT
GAGCATGTGG CCAAGCTTGG TCAACGCTTG CGTGAAGGCG TGAACGCCAA AGCTGAGGCG
CTTGGAGTGG CATTGCGCGT CTGTGGCTAT GATGCAATTC CCTTCTTCTC CTTTGCACCT
GATATGCCAA CCCATGCTCG TTTGATGGAA GCCTTGTTGG GCACATTGGC CAAACGTGGA
GTCATTTTGC GTCGCGATGT CAACTTCTTG ACCAGCGCCC ATACAGTTGA GCAAATTGAT
TTCACGATCG AGGCTGTCGC CCAAGGTTTA CAAGAATTGC TTGATCGCGG CATTATCGAA
TCGACCAACG GCAAAGAACA AGCTGCTGGC TAA
|
|---|
| Protein sequence | MSAAQLPKVS GEALNLTKSM ELLVQAEAIV PGTTQSLMKR PEQFAYGSFP VFIDHGDGAL
VTDVDGNQYI DFICGLGATT LGHNHLAVVE AIRNNLDKGL IHSLPTEVEL RATQALIDII
PNAEMARFFK TGADATSAAV RLARHLTKRE RIITVGYNGW HDHFMYYTPG VPAVLSQYTE
QVSLMAPHEK PNLIAAINNH GDQLAAVLLS MPYKHCLDAE YLNEVKAACH AVGALFVLDE
VVTGFRLALG GAQEFYGVDA DFVCLSKGIA AGMPLSAITG PKKHLERLSD LQVSTTFGGE
MLSLEVCYEV INIYRNTNYF EHVAKLGQRL REGVNAKAEA LGVALRVCGY DAIPFFSFAP
DMPTHARLME ALLGTLAKRG VILRRDVNFL TSAHTVEQID FTIEAVAQGL QELLDRGIIE
STNGKEQAAG
|
|---|
| |