Gene Haur_2779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_2779 
Symbol 
ID5734660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand+ 
Start bp3536888 
End bp3537559 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content53% 
IMG OID641279922 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001545545 
Protein GI159899298 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACGCA TTGGATTAAT TACCGGGGCT TCGCGTGGTT TAGGCCTAGC CTTAGCCCAA 
CAATTAGCCT TGAATGGCTG GCACTTAATT ATTACTGGCC GTGGAGCAAC CGCGCTTGAG 
CAGGCTCGCG CCGCTTTGGC AACGCACACG ACAGTTCAGG CAATTGCTGG CGATATTGCC 
GACCCAGCCC ATCGCCAAGC GTTGGCGGTT GCAACCCAAG CATGGGGGGG CTTAGATCTT 
TTGGTGAATA ATGCCAGCAT TTTGGGGCCA AGTCCCCAGC CAAATCTGCT CGATTACCCG 
CTTGATAATT TAGCTCAAGT GTATGCAATT AATGTATTTG CGCCATTGGC AGCAATTCAA 
ACATTAGCCC CAAGCTTCAA GCCAAGCATT CGAATTATCA ATATCAGCAG CGATGCGGCA 
GTACAAGCCT ACGAGGGTTG GGGTGGCTAT GGCTCAAGCA AGGCCGCACT CGACCAACTA 
ACCGCAATTT TGGCCGCCGA ACAGCCAACA TGGCGGGTGT ATGCCCTCGA TCCAGGCGAT 
ATGAACACCC AAATGCATCA AGAGGCCTTT CCTGGCGAAG ATATCAGCGA TCGGCCACCA 
CCAGAAGCGA GTGTACCTAC AATTCTGCGC CTGATTAACG ATGATCTGCC GAGTGGGCGC 
TATCGGAAGT AA
 
Protein sequence
MQRIGLITGA SRGLGLALAQ QLALNGWHLI ITGRGATALE QARAALATHT TVQAIAGDIA 
DPAHRQALAV ATQAWGGLDL LVNNASILGP SPQPNLLDYP LDNLAQVYAI NVFAPLAAIQ 
TLAPSFKPSI RIINISSDAA VQAYEGWGGY GSSKAALDQL TAILAAEQPT WRVYALDPGD 
MNTQMHQEAF PGEDISDRPP PEASVPTILR LINDDLPSGR YRK