Gene Haur_2683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_2683 
Symbol 
ID5734548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp3441994 
End bp3442377 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content47% 
IMG OID641279825 
Productanti-sigma-factor antagonist 
Protein accessionYP_001545449 
Protein GI159899202 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGACATCG TTAATATTCC AATTCTTAAG ATCGAGAACT TTTTAATTGC TTCGGTTCAG 
GTTGCCCTGT ATGACATGCA AGCAATTCAG TTCAAAGACG CGGTTCTCCA GAAGATCTAT
GAGACCAAAG CAAAAGGGGT CATCATCGAT CTAACGGCGA TGGATGTATT AGACAGCTTC
GTAGGCCGCT TGATTAGTGA TATTGCGGCG ATGGCTCGCC TGATGGGGAC AACCGTTGTT
ATTACAGGGT TGCAACCTGC CGTCGCAATT ACGTTGGTGG AGCTTGGGCT TGAGTTGCCT
GGTGTCACAA CGGCGCTGAA TTTGGAAAAA GGCATCGCTA AGTTGCGGCT GATTACGGAG
AACAATGCGG ATGGCAATGC CTAA
 
Protein sequence
MDIVNIPILK IENFLIASVQ VALYDMQAIQ FKDAVLQKIY ETKAKGVIID LTAMDVLDSF 
VGRLISDIAA MARLMGTTVV ITGLQPAVAI TLVELGLELP GVTTALNLEK GIAKLRLITE
NNADGNA