| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_2533 |
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| Symbol | |
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| ID | 5734411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 3237571 |
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| End bp | 3239967 |
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| Gene Length | 2397 bp |
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| Protein Length | 798 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641279673 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001545299 |
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| Protein GI | 159899052 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3903] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.617329 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCAGC ATCTCTGGCA GGTTGAATGG CTCCAACAAT TACTGCAACA ACCGCATATC
GCCCTCAATC AGCCAGCCAT CAAGCAGCTT GTCCATGCCA AAGGTGGTCT GCATCCATTA
TTGCAATGGC TTTGCCAACA ACCATTACAG CCAGATCAAC AACGCTTGCT ACAATTGATT
GTGGCCGAGC CTCAACGCAG CATCGCCTAT TATGCCGATA GTTTAGGCAT TCATGCGACT
ACCTATCATC GCCATTTCAA AAAGTTATGT CAATATCTAC TGACGCGCCT AAATGATGGT
ATTGCCGAAC CGCAAGCCAG TGCCAGTTTT AACCTGCCAA TTCCACCAAC CCGCTGCTTG
GGCCGTGGCA ATGAACAACA AACCATCAAT CGGCTGTTTG CCAAAGGCCA ACGCTTAATC
AGCATTTTGG GGTTTGGTGG GGTGGGCAAA ACCCGCTTGG CATTGGCAAT TGCCGAAATC
CAGCAGGCGC ATTATCGCGA TGGCGTTTGT TTTTGTGGGC TAGCCAGCAT CAGCCAGCCG
CAATTGGTTT TAGCAACGAT CGCCGAAGCA CTTGGCGTAG CGATTGGCCC ACAACAAACC
CCTGAAAAAG CGCTACAACA ATTCCTTGCT AAGCGCCAAA TCCTGCTAAT TTTGGATAAT
GTTGAGCATG TCGTTGAAGG GGTTGCCGCG ATTGGTCAGC TGTTGCGCGA AGCACCACAG
TTGCAAATTT TGGCAACAAG CCGTGTACCG CTCAATTTAT ATGGCGAATA TATGCTGCAA
CTTCAGCCGT TGGTCGTGCC AACCAAGCCA ATTGCCAGCC AAGATTTAGC TGAAACGCCA
GCAATTGCCC TGTTTATTGA GCGTGCTCAA AGCCATGCTG CTAGATTTAG CCTCGATGAC
GCTAGCCTTG AAGCCATCCG CCAAATTTGT AGTCAACTTG AGGGCTTACC TTTAGCACTC
GAATTAGCGG CTGCGCATAC CCGGGTACTT TCGCCGCAAC GCTTAGTTCA ACAATTAAGC
AACCATGTGC TTGGCCTCAA AACCAGCATC CGCGATTTGC CCGAACGTCA ACGCAGCCTG
CGCAACCTGA TTAGCTGGAG CGTCGATCTG CTTGCGCCAA GCCAGCAACA AGCCTTGCAA
GCCTTGGCAA TTTGGCCCGC TGGCTGGACG CTCAGCAGTG CGAGCTTTGC GCTTGATCTA
GCCGAGGATG ATCCGGCACT CTACGACATT TTGGCAAACT TGGTCGATCA TCATTTGATC
ATGCAAGTGC CTCATGCTGA GCGCTGGGTT TTGCACCCGT TTGTCCGTGA ATATGTGCTC
GAACAACTAG CGCCAGCCCA ACAGCAACAA TTTGCCCAGC AACATTTGGC GTGGGCTACC
CAACTGAGCG AGGCCTTTAA CCAGCATTTT GCCGCTGCCC AACAACAATG GCTCGATTTA
TTCGAGGCCG AGCACGACAA CCTCCGAGCA GCCTTGGCTT GGGCCAGCAG CAACCACTAC
CCGATTGCTG CATTGAATAT TGCCGTTAAT AGTTGGCGTT TTTGGTGGGC ACGCAGCTAT
TTCAATGAAG GCCAACAATG GCTGGATCAA ACATTAGCCC AAGCCACGAG CCAAACCCAA
AAGCTTGAGC CAACCCTGCA TTCACGCGCC TTGAATGCCT GTGGAGCTAT TGCTTGGAGC
CGTGGCGATA TTGCAGCAGC CCAAGCGCAT TTTAGCCAAA GCCTCGCCCT CTACGATGCC
AACAACAACC CAATTGGCGC GGCGATGGTG CGCAATAATC TAGCACTGGT GGCAATTAAA
CAGCAGGCCT ATGCCCAAGC TGAAAGCTTA TTTGAGCTGA ATGCAGCAGT TTTTGGTAGC
ACGGTCGAAC AAGCTGCAAA TTATGCCGCA ACCTTGAGCA ATTTGGCCAT GTTGGCGCGT
TATCGTGGCG ATTTGGAACG CGCCTATGAT TTGGCCCAGC AAACCCTCAC CCTACGTCAA
ACCCTCAATA ACCAGTGGGC AACCGCAACG TCATTGACCA ATTTGGGTGC GATTAGCCTA
CAACGCGGCG AATTTCAGCC AGCCCAACGT TATTATCAAC AAAGCTTACA GGTGTTGCAC
CAACTTGGCG AGCGCGAAAG TATCGCCGAA TGTTTGGAGG GCTTGGCAAT TTTGGCAATT
CAAGCAGGCC AATACCAGCT TGGGGCACAG CGCTTGATTG TGGTCGAACA CTTACGCGAA
TCAATCGGCG CACCCCGCTC TGAGCCAGAG CAAGCCCTCC TAGCACCATG GATCAGCCAA
CTAGAGCAGC AGCTTGACCT AGGCATTCGT CAACAACTCC GCCAACAAAC CAGCCTTGAT
CGGCTCGAAT CCATGATCGA GCAAGCGTTG AACGAGGGGG TAGAGGCTAG GGGTTAG
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| Protein sequence | MNQHLWQVEW LQQLLQQPHI ALNQPAIKQL VHAKGGLHPL LQWLCQQPLQ PDQQRLLQLI
VAEPQRSIAY YADSLGIHAT TYHRHFKKLC QYLLTRLNDG IAEPQASASF NLPIPPTRCL
GRGNEQQTIN RLFAKGQRLI SILGFGGVGK TRLALAIAEI QQAHYRDGVC FCGLASISQP
QLVLATIAEA LGVAIGPQQT PEKALQQFLA KRQILLILDN VEHVVEGVAA IGQLLREAPQ
LQILATSRVP LNLYGEYMLQ LQPLVVPTKP IASQDLAETP AIALFIERAQ SHAARFSLDD
ASLEAIRQIC SQLEGLPLAL ELAAAHTRVL SPQRLVQQLS NHVLGLKTSI RDLPERQRSL
RNLISWSVDL LAPSQQQALQ ALAIWPAGWT LSSASFALDL AEDDPALYDI LANLVDHHLI
MQVPHAERWV LHPFVREYVL EQLAPAQQQQ FAQQHLAWAT QLSEAFNQHF AAAQQQWLDL
FEAEHDNLRA ALAWASSNHY PIAALNIAVN SWRFWWARSY FNEGQQWLDQ TLAQATSQTQ
KLEPTLHSRA LNACGAIAWS RGDIAAAQAH FSQSLALYDA NNNPIGAAMV RNNLALVAIK
QQAYAQAESL FELNAAVFGS TVEQAANYAA TLSNLAMLAR YRGDLERAYD LAQQTLTLRQ
TLNNQWATAT SLTNLGAISL QRGEFQPAQR YYQQSLQVLH QLGERESIAE CLEGLAILAI
QAGQYQLGAQ RLIVVEHLRE SIGAPRSEPE QALLAPWISQ LEQQLDLGIR QQLRQQTSLD
RLESMIEQAL NEGVEARG
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