| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_2408 |
|---|
| Symbol | |
|---|
| ID | 5734289 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 3070063 |
|---|
| End bp | 3071406 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641279549 |
|---|
| Product | glycosyltransferase family 28 protein |
|---|
| Protein accession | YP_001545176 |
|---|
| Protein GI | 159898929 |
|---|
| COG category | [C] Energy production and conversion
[G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1819] Glycosyl transferases, related to UDP-glucuronosyltransferase |
|---|
| TIGRFAM ID | [TIGR01426] glycosyltransferase, MGT family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACGA TTGTTATCAG TATGTTTCCC GAAGAAGGCC ATCTTATTCC TAGTTTCAAG
CTTGGCAAGA GCTTAAAAGC CCAAGGTCAT CAGGTTTATT ATTTAGCCTT GGCCGATTTT
GAGGAGTATA TTCGCAAGCA GGGTTTTGAA TATTTGCCCT TGTTTGCTGA GGATTTTCCC
AAGGGCTTTC GTGCTCAGCA AACCGAGCGA ATTGCGAACA CCCGTGGCCG AGCCTTTTTG
AAAGAGGTTT CACAAACGGC GTTTTATCTC AAGTTGTTTC AAACTGTACA TGAAGATCAA
AATCCAATCA AGCGTAGTTT GTTGGAAATT GGGACAGATT TATGTCTTTT TGATGGATTT
TTGGCCCCGC TGAGCCTTAT GGCGCGGCAT GCTGGGCTGG AAGTAATTAG TCTGAGTATT
AATATTAATC TTCCGCAGGC CGCCAATTAT CCGCCAGTTG TCACCAATAT TGTGCCCGAT
AACACGCCTG CCTCGCTCTC TAAAGCTGGC ATGGCTTGGA AATTTAGTGG GCTAGCAATC
AAAATAACCA ACCTTTTGAT TGGCTACAAT TTCCAGAAAA AGCTAACCGA ACTGGCAACC
CACTTTGGGT TTTCAGCCGA TTTAGTTGTG CCAGCGGCCC TCTTTCCACG CTTGCGACCC
CAACTTGAGA TACCCGAACT CGTGCTTTGC CCGCAAGCCT TTGATTTTCC ACGGCCAAGC
GTTGAGCAAG GGATTTTCTA CTGTGAGCCA TCAATCGATC TTGATCGCCA AGAAGCGGCC
TTTGATTGGT CGCAGATTGA CCCCAACAAG CCGCTGATTT TTTGTACCTT GGGCAGCCAA
AGCCATATCT ACAAGCCAAG TCGGCGCTTT TTTCAAACCG TGATCGACAC CATGCGCAGT
CGCCCCGATT GGCAATTGAT TATGGCGCTC GGCCAGAAAT TTCAAGCCCA TGAATTTGCC
AATGTGCCAG CCAATGTGCA GTTGCTGCAA TGGGCTTCGG TCGAGCAAAT TTTGCCGCGC
ACCAGCGTGA TGATTACCCA TGGCGGGGTT GGCACGATTA AGGAATGTGT CTATTTCAAC
GTGCCAATGG TGGTTTTTCC AGGCAACCGT GATCAACCTG GCTATGCGGC GCGGGTTGTT
TACCATGAGC TAGGTTTGAT GGGTTCGATG GGGAAAGTTT CGGCCCAAGC GCTGGAAACC
ATGCTCAACC AAGTGATTCA AAATCCTAAC TTTAAACAAC GAGTTACGGC AATGGGCGAG
GAATTTCGCG CCTTGGAAGC TGCTAGCCCA GCGCTGGAAT TAATTCAAAG CAAATTACCG
CATACCCGAA CCGTTGCCTC GTAA
|
|---|
| Protein sequence | MATIVISMFP EEGHLIPSFK LGKSLKAQGH QVYYLALADF EEYIRKQGFE YLPLFAEDFP
KGFRAQQTER IANTRGRAFL KEVSQTAFYL KLFQTVHEDQ NPIKRSLLEI GTDLCLFDGF
LAPLSLMARH AGLEVISLSI NINLPQAANY PPVVTNIVPD NTPASLSKAG MAWKFSGLAI
KITNLLIGYN FQKKLTELAT HFGFSADLVV PAALFPRLRP QLEIPELVLC PQAFDFPRPS
VEQGIFYCEP SIDLDRQEAA FDWSQIDPNK PLIFCTLGSQ SHIYKPSRRF FQTVIDTMRS
RPDWQLIMAL GQKFQAHEFA NVPANVQLLQ WASVEQILPR TSVMITHGGV GTIKECVYFN
VPMVVFPGNR DQPGYAARVV YHELGLMGSM GKVSAQALET MLNQVIQNPN FKQRVTAMGE
EFRALEAASP ALELIQSKLP HTRTVAS
|
|---|
| |