Gene Haur_2229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_2229 
Symbol 
ID5734116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp2835443 
End bp2836435 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content49% 
IMG OID641279370 
Producthypothetical protein 
Protein accessionYP_001544997 
Protein GI159898750 
COG category 
COG ID 
TIGRFAM ID[TIGR03157] CRISPR-associated protein Csc2 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCATTT TGAATACCTA CCAAAACTAT TTGATGGATC AATACAATCC CTATCCTCAT 
GGCCGTTTCG TCAGCTTGTT TATTGTACGA CATGTCGAAT CCGAGGCCAT GTTCCGCACC
GAAGGCAGCG GCGAACCACT CAATCGCGAG TTTGTATTTG CTGGCAAGCA AGGCGGCGAT
AATCAACTTA TTCAACGGGT CGTTATTAGC AAACGCAAAC AAATTGCCGT CGAACGGCGC
ATGGGTCGCG AGCTACTGCG CGAATATGCA CTTTTGCAAA AAACAGCCAA AGGTGAGGGA
ATTTGCTCGC TCAATACCAA CAATCCTTGC GAACGCTGTA TCGATTGTAT GGTGTATGGC
TATGCTGCGG GTGGCGGCGG AGCACAACGC TCACGGGTGA TTACCGACGA CGCATTTAGT
CTCCATTCAG CAGCAACCAT TATTGGCACA CGCCAATTCA ATGCCTTGTT TGATAACAGC
ACCATGCGCA ACCCCGAAAC TGGCGAGCCA TCAACCAGCA TTGGCACCGA TGAATATGTC
AAGCCCGAAA GTGTCTTTCT CGATATCGAA ACCCTCAAAG ATGTGACCGC CGATGAATTT
CGCTATATCG TGGGCAACAT TTTGCGCTCA AGTCGCTATG GGGCAATCTC TTCACGGATT
GGTAAAACCC GCAATAATTT GATTGGCGTG GCTTGGAGCA ATTGCGAGTT GTTCTCTAAC
CTTGAGTGGG TTCAAGAAAC CTATGAATTA TTGCGCGAAG ACCAGCATGA ACCATCGTTT
CCCCTTCACA CCAGTGCTGT TGCCAAAGCT GCTCAAAGCG CCATGCAAAC CCTGCGCCAA
CGGGTGATTG GTCAAGTTAA CTGGCTCAAC TCCGATGAAC TTGGCAATTT GGTCGATGAA
CTGGGACAAC TCTATGCCAA CCCCGAACAA CTCAAGGCAA TGCTCAGCCG CTTGGCCACC
AGTTATCCGA TGACCCAGAA AAAAGGAAAA TAA
 
Protein sequence
MSILNTYQNY LMDQYNPYPH GRFVSLFIVR HVESEAMFRT EGSGEPLNRE FVFAGKQGGD 
NQLIQRVVIS KRKQIAVERR MGRELLREYA LLQKTAKGEG ICSLNTNNPC ERCIDCMVYG
YAAGGGGAQR SRVITDDAFS LHSAATIIGT RQFNALFDNS TMRNPETGEP STSIGTDEYV
KPESVFLDIE TLKDVTADEF RYIVGNILRS SRYGAISSRI GKTRNNLIGV AWSNCELFSN
LEWVQETYEL LREDQHEPSF PLHTSAVAKA AQSAMQTLRQ RVIGQVNWLN SDELGNLVDE
LGQLYANPEQ LKAMLSRLAT SYPMTQKKGK