Gene Haur_2120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_2120 
Symbol 
ID5734008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand- 
Start bp2662649 
End bp2663647 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content54% 
IMG OID641279261 
Productperiplasmic binding protein/LacI transcriptional regulator 
Protein accessionYP_001544888 
Protein GI159898641 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.0534772 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCATTT CACGAACATT CGCCGCGCGT CTGATGGCGC TCCTGGTTAT CGTCGGGCTA 
GCTGGTTGTG GTGCCTCGAG TGCGCCCACA ACGGCACCAG ATGCGCCTGC AACAGGGGCC 
AAAACCTACA GCGATATGGT GCTGTGCTAC CCGCAGCTTG GGGCTGAAAG CGACTGGCGC 
ACCGCCAATA CCGCTTCGAT CAAGGAGACC GCAGCAACCT TGGGAATTAA GCAATTGGTT 
TTCTCTGATG CCCAGCAAAA GCAAGAAAAT CAAATTTCTG CCGTGCGTGC CTGTATCCAG 
CAGGGCGTGG ATGTGATTGC ACTGCCACCA GTCGTTGAGG ATGGCTGGGA TGCTGTTCTG 
ACCGAGGCCA AGAATGCAGG TATTCCGGTG ATTATCGTTG ATCGCAGTGT GAGTGCCGAC 
AAATCCCTCT ATAGCACCCA TATCGGCTCC AATATGGTCT TGGAAGGTGA ACGGGCCGCT 
GCTGAATTCA ACAAAATGAT GCCAAACGGC GGCGCGATTC TCGAACTTTC GGGAACGACA 
GGTTCTGGTG CAGCGGTTGG TCGGGCAAAG GGTTTGCGCA ATAAACTCAA TTCCAACATC 
ACCATTATCG ATTCACAGAC TGGCAACTTC ACCCGTGCCG AGGCCGTCCC TGTGATGCAG 
GCACTTCTGA AGAAATATAC CCCGGGCACG GATTTCCAAG GCATCTTTAT TCACAACGAC 
GACATGGGCA TCGGCGTGAT CGAAGTTCTC AAGGCTGCTG GGATCAAACC AGGCGATCTC 
AAGATTGTGT CGGTTGATGG TACTCGCGGC GGTTTCCAAG CCATGGTTGA TGGCTGGTTC 
CAAGCCGATG TTGAGTGTAA CCCGCTGCTT GGCCCACAGG TATTCGAATT GGCGCTGAAG 
CTCATGAACG GTCAGCCAGT CGAGCCAGAA GTCATCACCA ATGAAACCGT CTACTATCCA 
GAGAATGCAG CTGAACTGTT ACCAACCCGC AAATACTAG
 
Protein sequence
MSISRTFAAR LMALLVIVGL AGCGASSAPT TAPDAPATGA KTYSDMVLCY PQLGAESDWR 
TANTASIKET AATLGIKQLV FSDAQQKQEN QISAVRACIQ QGVDVIALPP VVEDGWDAVL 
TEAKNAGIPV IIVDRSVSAD KSLYSTHIGS NMVLEGERAA AEFNKMMPNG GAILELSGTT 
GSGAAVGRAK GLRNKLNSNI TIIDSQTGNF TRAEAVPVMQ ALLKKYTPGT DFQGIFIHND 
DMGIGVIEVL KAAGIKPGDL KIVSVDGTRG GFQAMVDGWF QADVECNPLL GPQVFELALK 
LMNGQPVEPE VITNETVYYP ENAAELLPTR KY