| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1954 |
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| Symbol | |
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| ID | 5733843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 2369647 |
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| End bp | 2374734 |
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| Gene Length | 5088 bp |
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| Protein Length | 1695 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641279098 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001544725 |
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| Protein GI | 159898478 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATTT TTCAGCTTCG CAACCAGATT ATTGATCAAT ACAGTCAATA TACCCAAGGG
TTTCTTAGCA TCCTTGATCC CGAGATTCAG CAGTTTGTAA CCAGCAACAT TCAGGGTGGT
TCGCTCTGGC CCGATGCCCT AATTCAATTG TCGCCGGCCT ACCAACAAGG GGGCACAGTT
GAGGATTTGG TTAACGCTCA GAAACTCCAT CCATTATGTC AATATATTTT CCAAAAGCGT
GATCGCCAGC AACAACTGCG TTCACTCAAG TTATACAGCC ACCAAATCAC CGCTTTGGGC
TTGGCGCAAG AAAAACGCCA TTATGTCGTA ACAACTGGCA CTGGCTCGGG CAAAAGTCTC
ACCTACATCC TGCCTATTTT CGATCATGTG CTTAAACATC AACCAGAACA AGGCAAAGTT
CGGGCAATTA TCGTCTACCC AATGAATGCC TTGATCAACT CGCAAATGGC AGCAATTAAG
GAATTTTTAG GCCATCTAGG CGACGCTTGT CCAATTCGGG TCGAAAGCTA TACCGGGCAA
GATAAAGAAG CAACCAAACG AGCAATTCAA GCCAACCCAC CGCATATTTT GCTCACCAAT
TATGTCATGC TCGAATTGAT GCTCACCCGG CCCGACGAAG CGCCATTTGT TGATCAGCAG
ACGGCAAATT TACAATTTCT GGTGCTCGAT GAGCTGCATA CCTACCGAGG CCGTCAAGGT
GGCGATGTCG CGCTGTTGGT GCGTCGTTTA CGCGAACGCA GCGGCAATCC AGAATTGATT
TGTATCGGAA CCAGCGCAAC CATGGCCAGC AGCACCGTCG CTGATGATCG CAAAAGCGCA
GTTGCGGCAA TTGCTAGCAC CATTTTTGGC GTTAACATTC CTGCTTCGCA GATTATCGAA
GAGCAATTGA TTAAATCGGT GATATTTTTC GGCCAACCCT CAGCGAGCCA ACTCCGTGAA
ACGTTGCTCC AGCCAATTCC TGCCACGATG GAATGGGATA CCTTCAAATA TCATCCGTTA
GCCGCGTGGA TCGAACAAAC CTTTGGCATC ACCACCGATC AGACCAATAC CCTGCGCCGC
GCCAAACCCA AAACCCTTGC CCAAGGGGCA CAAGCGCTTG CTGACGAGAC CGGAGTTGAT
CAGGCACACT GTTTACACCA GCTTCAGGCA ATGTTGCAAC TTGGTAGCAC CGTTGAGGAT
GCGCTCAATG GTCGGCAGGC CTTTACCTTT AAACTGCATC AGTTCATCTC GCAGGGCGGC
ACGATCTATG CAACCCTAGC CCATCCGCCT GAGCGCAAAC TCACCTCAGA AGGCCAACAT
ACCATTGGCG ACCGTGATAA CCCACAGCTG TTATTTCCAC TGGTCTTTTG TCGTAACTGT
GGTCAACACT ATTATCAATG CAATTACGAT GCCCATAGGC AAACGCTCCT GCCACGTCAG
CCCTTTGCCC AAAGCCACGA GCAGAGCACC AGCATGCCTG GCTATGCCTT GCTCGGCGAA
GATGTTTGGA GCGACGACGC GATTGAGATG TTGCCAGATA GCTGGTTTAA CAAAAGCACC
AATGGCCGTG GAACAGTCAA AAAAGATTTT AAGCAGTTTA TCCCCCAACG ACTTACGGTT
CGGACGAATG GCAGCCTTGG CAACGAGCAT GATCCAACGG CATGGTTTAT TCCAAGCCCG
TTTCTGAGTT GTTTAAACTG CGGCACGCTC TATACCAAAC GTGAGAGCGA TTTTAGTAAA
TTAGCGCGGC TCAGCAGCGA AGGCCGCTCC ACCGCCACGA CGGTCCTCGC CTTGGCCACA
GTTCAGCAGC TACGCCAGGC CTTGCCCGAG CAGCCTGCGG CCCAAAAGAT GCTCAGTTTT
ACCGATAACC GCCAAGATGC ATCACTTCAA GCGGGCCATT TCAATGATTT TGTGAGTGTG
GCCCAACTGC GGGCAGCAAT TTATAGCGCG GTTCGTCAAC AGCCTGCTGG TCGCGCCCTC
GACTACACCA CGATTGCCCA AGCGGTGTTT GAGGCGCTTA ATTTGCCTCA AACAGCCTAT
GCCAAAGAAG AAACTACGCT GCCAAATAAG CGGGCAAAAA TCGACGATGC CTTGATTCGC
TTGATTGAAT ATCGGATCTA CGAAGATTTA CGCCGAAGTT GGCGTGTAAC CCAGCCCAAC
CTCGAACAAG TTGGCTTGCT ACAGATTGAT TACGATGGGC TTGACGATTT GGCCCAGCAA
ACCGACCTCT GGGCCAGACA CGAGCTACTT GCCGCAACCC CCTCCCACCA ACGGGAACAA
ATTCTGCGGA CAATCCTTAA TTATATGCGT AATGGATTAG CGATCAATGC TCCATGTTTG
CAAGAGCAGG AGCAAAAACG CATGGTCACC AGCATCGAAG CCCTGCTCCA AGAATCGTGG
CAGATGAATG AACGCGAATT CACCTCAGCC AAACGCTTTA TTGTGCCAAC TCCCGACGGT
AGAGGTTCGG GCGACGGCCA GAGCTTAGGC GCTAGCTCAG CTTTAGGTCG ATTTTTACGG
GCGGAACAAA CCTGGCCAAG CCTCACCAAA ACCCTCAGTG AAAAGGAATA TTGGCCGCTG
CTCGAAGTGC TAGTTGAAGC CTTAGTTGGC AATATCTTGA CCGATGTTGG CACGGGAGCC
TCGCGCGAGC TGCAAATTAG CCGCGATGCC TTGCTCTGGC GAGCGGGCGA TGGCACACCT
CCGCCGCCCA ATCTCGCTCG TTCGCGGATG CTCAAGGGTT TTAGCCCAGC GCCACGGCCA
ATCAATCGCT TTTTCCAAAA TCTGTATCAG CATATGGCCC ACAATCTGCA AGCGATGGAA
AGTCGCGAGC ATACCGGGCA AGTTGCTCAA GCAAAACGCC AAGACCGCGA GCAATGCTTT
AGTGCCGGAA CCTTGCCTGT CTTGTTTTGC TCGCCAACGA TGGAGTTAGG CATTGATATT
GGGGATTTGA ATGTGGTGCA TATGCGCAAT GTGCCCCCAA CCCCCGCCAA TTATGCCCAA
CGCTCAGGCC GCGCCGGACG CTCAGGGCAA CCAGCCCTGA TCGAAACCTA CTGCTCGGTT
GGCAGCGGTC ACGACCAATA CTTCTTTGAT CGTCAGCCAG CGATGGTGGC TGGGGTGGTT
GCCCCACCAC AGATCGATTT GGTCAACGAA GATTTGCTGC GGGCACACAT TCATGCAGTC
TGGTTAAGTA AAACTGGCCT TGGCATGCAA CATTCAATGT TGGATCTGGT TGATACGAGC
CAAGTTGGGT ATCCACTTTG GCCAGCGATT CAAGCCCAAA TTCATCTTTC GCCGCCCCAA
CAAGCTCAAT GCATTGAGGC ATGCCAGCGC ATTATCGATC AGTGCCAGAT TGATCTGGCG
ACCTTGCAAA GCTTTGGCCC ACAGTATGTC GAGCGCACCT TAGCTGAAGC TCCGATGCAG
TTCGATGCAG CCTGTGAGCG CTGGCGCGAG CTATATCGGG CTGCCGACGA GCAAGTGCGC
GAAGCCCGCA ACCTCATGGA TCGTGGGCAT CAACGCTCAG GCCGTAGCCC AGAGGCCGAT
CAAGCCCGTC GCCGTCACGG TGAGGCCTTA CGGCAAAAAG ATATCTTATG CAATCAATCG
CGCAGTGAAT CAGGCAGCGA CGCAGATTTT TATCCCTATC GCTATTTTGC TAGCGAAGGA
TTTTTGCCAG GCTACAACTT TCCACGGCTC CCAGTTCGCG CCTTCCTCTG CGATCATACC
GGCGATGGCG AGTATTTATC GCGGCCACGG TTTCTGGCCC TAACCGAGTT TGGCCCACGC
AATATTATTT ATCATGAGGG CAAACAATAT CGGATCATTC GCTCAGCGCT CCCAGCCACC
AATGCCCAGC AGCGTTTTAT CCAAGCCAAA GTTTGCCTTA TCTGTGGCTA TTTCCACAAC
GATTCAGCTG TTCAGCTCGA TGTATGTTCA AACTGTGGCG CACGATTTGA TGAAAAAACC
AGCGAATTAC TGCCCGATCT GTTGCCGATG AGCACGATAA CCGCCCAGTC GATCCAACGC
ATTACCAGCG AGGAAGAGGA ACGAATGCGC TTCGGATTTA CGATCTCAGC TCATTACCAG
TTTTCGCGCG ATCACGTAGG GTTTCGCCGA ATCGCGGCCC GCACCAAGAC AACCGCGCTT
AGCCTTGACT ATGGCCATGC CGCAACCCTT TGGCGGGTTA ACCATGGCTG GCGACGGGCC
AAAATGAAAG GCTTCAGTAT CGATTTACAG TCGGGGCTGT GGGCCAAAAA TCCCGAAGAA
GATAGCACGA CGTTTGACCC AACCAACGAG ACTCGGCGGA ATGTGCGGTT AGTCGTTAAT
GATACTCGTA ATATGTTGTT GGTACAGCCA ACACCCGAGC TAGCCGACAA TTCCGAAGCA
CTATTTAGCC TTCAAGCGGC CTTGGTACGG GGCATTCTTG CAATATTCCA GCTTGAAGCA
CAGGAGTTAG AAGCGCAAGT GCTGGGCTAT CAAGCCGATC GTCGAATGTT GCTCTGGGAA
GCATCCGAAG GAGGCGCTGG TGTGCTACGC CAGCTCGTGG AAGATCCACA GGCCTTGGCC
CGAGTTGCCC GAGCAGCCCT AGAAATTTGC CATTTTGACC CCAACACTGG GGCAGAACAA
ATAGATCAGG CGGGTGAATG TGTCCGAGCG TGCTACCACT GCCTGCTCTC CTATAGCAAC
CAGCCAGAGC ATGCCTATCT AAACCGCCAC GCAATTCGTG ATATGTTGCT GCAATTGACC
CATGATCAGG TTGAGCACGA AGGTGGTTTG GATGAAACGA GCCTTGAGCG CTTATTAGCT
CAAACGCCGA CAGGATTTGT GCGCGAAGTA TTGGAATGGC TTGACCAAAA CGGCCAGCGC
TTACCTGATG CCATTGAACC TGAGCTGCAA GGTGGTCGTC CGCATTTATT TTACGCGGCC
AGTGCTGATA GCCCAAGCAC CTGCGTATTA TGCATCGAAG CAGACGAATC GCTTGATGGC
TTGCGTTGGG ATTTAGAAGA GCTTGGTGGA TATAAAGTGA TTACCCTGCA TCGCGACCAA
GCTTGGCAAC AGCAGATTAT CGGTCAACAA CCATTTACCA AAGCCTAG
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| Protein sequence | MDIFQLRNQI IDQYSQYTQG FLSILDPEIQ QFVTSNIQGG SLWPDALIQL SPAYQQGGTV
EDLVNAQKLH PLCQYIFQKR DRQQQLRSLK LYSHQITALG LAQEKRHYVV TTGTGSGKSL
TYILPIFDHV LKHQPEQGKV RAIIVYPMNA LINSQMAAIK EFLGHLGDAC PIRVESYTGQ
DKEATKRAIQ ANPPHILLTN YVMLELMLTR PDEAPFVDQQ TANLQFLVLD ELHTYRGRQG
GDVALLVRRL RERSGNPELI CIGTSATMAS STVADDRKSA VAAIASTIFG VNIPASQIIE
EQLIKSVIFF GQPSASQLRE TLLQPIPATM EWDTFKYHPL AAWIEQTFGI TTDQTNTLRR
AKPKTLAQGA QALADETGVD QAHCLHQLQA MLQLGSTVED ALNGRQAFTF KLHQFISQGG
TIYATLAHPP ERKLTSEGQH TIGDRDNPQL LFPLVFCRNC GQHYYQCNYD AHRQTLLPRQ
PFAQSHEQST SMPGYALLGE DVWSDDAIEM LPDSWFNKST NGRGTVKKDF KQFIPQRLTV
RTNGSLGNEH DPTAWFIPSP FLSCLNCGTL YTKRESDFSK LARLSSEGRS TATTVLALAT
VQQLRQALPE QPAAQKMLSF TDNRQDASLQ AGHFNDFVSV AQLRAAIYSA VRQQPAGRAL
DYTTIAQAVF EALNLPQTAY AKEETTLPNK RAKIDDALIR LIEYRIYEDL RRSWRVTQPN
LEQVGLLQID YDGLDDLAQQ TDLWARHELL AATPSHQREQ ILRTILNYMR NGLAINAPCL
QEQEQKRMVT SIEALLQESW QMNEREFTSA KRFIVPTPDG RGSGDGQSLG ASSALGRFLR
AEQTWPSLTK TLSEKEYWPL LEVLVEALVG NILTDVGTGA SRELQISRDA LLWRAGDGTP
PPPNLARSRM LKGFSPAPRP INRFFQNLYQ HMAHNLQAME SREHTGQVAQ AKRQDREQCF
SAGTLPVLFC SPTMELGIDI GDLNVVHMRN VPPTPANYAQ RSGRAGRSGQ PALIETYCSV
GSGHDQYFFD RQPAMVAGVV APPQIDLVNE DLLRAHIHAV WLSKTGLGMQ HSMLDLVDTS
QVGYPLWPAI QAQIHLSPPQ QAQCIEACQR IIDQCQIDLA TLQSFGPQYV ERTLAEAPMQ
FDAACERWRE LYRAADEQVR EARNLMDRGH QRSGRSPEAD QARRRHGEAL RQKDILCNQS
RSESGSDADF YPYRYFASEG FLPGYNFPRL PVRAFLCDHT GDGEYLSRPR FLALTEFGPR
NIIYHEGKQY RIIRSALPAT NAQQRFIQAK VCLICGYFHN DSAVQLDVCS NCGARFDEKT
SELLPDLLPM STITAQSIQR ITSEEEERMR FGFTISAHYQ FSRDHVGFRR IAARTKTTAL
SLDYGHAATL WRVNHGWRRA KMKGFSIDLQ SGLWAKNPEE DSTTFDPTNE TRRNVRLVVN
DTRNMLLVQP TPELADNSEA LFSLQAALVR GILAIFQLEA QELEAQVLGY QADRRMLLWE
ASEGGAGVLR QLVEDPQALA RVARAALEIC HFDPNTGAEQ IDQAGECVRA CYHCLLSYSN
QPEHAYLNRH AIRDMLLQLT HDQVEHEGGL DETSLERLLA QTPTGFVREV LEWLDQNGQR
LPDAIEPELQ GGRPHLFYAA SADSPSTCVL CIEADESLDG LRWDLEELGG YKVITLHRDQ
AWQQQIIGQQ PFTKA
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