Gene Haur_1916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_1916 
Symbol 
ID5733805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand+ 
Start bp2310054 
End bp2310740 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content40% 
IMG OID641279060 
Producthypothetical protein 
Protein accessionYP_001544687 
Protein GI159898440 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGCT ACACAATCAA AATTACACTA TTGAGCGATA CAACTTTTGG GACTGGTGAT 
GGCATTGTTG GTTTAATTGA TCAAGAAGTT GAATATGATC AGTATGGATT TCCATTCTTG 
CGCGGACGCA CGCTCAAAGG TTTGCTTTGT GATGAATGCG ATACCTTTAT TGCTGGAATT 
GAATCTAATT CTAATCCTGA ATTTGATGAA ATTCGACGAA TGCGTGACCA ATTATTTGGA 
GTTGGTGGGA GTGTAGCTAG AAAAGAATCA CGCTTGCATT TTAGTGATGC GATTTTACCA 
TTAGCGATTC AGAATACGCT TAAAAGCTAT GAATTACCAA CCCATGAAAT ACTCAATGCA 
TTAACCGTTA TTCGTCGCCA AACTGCGATT GAGAATGCTA CAGGAGTGGC AAAGCCACAT 
AGTTTACGGT CGCAACGGGC AGTTATTCAT GGATTAACCT TTGAATCTAT AATTGATTGC 
AAACAAGATT TAGAACCAGC AGCCAAAGAA TTATTAGATC TCAGTTGTCG TTTGTTACGG 
CGTTTGGGCA CACAGCGCAA TCGTGGCCGT GGCCGAGTTA AATGCTGCTT GATCGATCAT 
TCCTCAGCGA ACCAGCATGA TAGAGATGAA CATAATAAGC CAAATAATTT TTCTACATTG 
AAGCAATTAC TGGGAGTTGA AGCATGA
 
Protein sequence
MSSYTIKITL LSDTTFGTGD GIVGLIDQEV EYDQYGFPFL RGRTLKGLLC DECDTFIAGI 
ESNSNPEFDE IRRMRDQLFG VGGSVARKES RLHFSDAILP LAIQNTLKSY ELPTHEILNA 
LTVIRRQTAI ENATGVAKPH SLRSQRAVIH GLTFESIIDC KQDLEPAAKE LLDLSCRLLR 
RLGTQRNRGR GRVKCCLIDH SSANQHDRDE HNKPNNFSTL KQLLGVEA