Gene Haur_1781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_1781 
Symbol 
ID5733683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand+ 
Start bp2070731 
End bp2071399 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content47% 
IMG OID641278924 
Producthypothetical protein 
Protein accessionYP_001544552 
Protein GI159898305 
COG category[S] Function unknown 
COG ID[COG3501] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGAGC TATTGCAGAT TATTCAGCGG GTTGCCGAAC GCAGCACTCA GCGTATCCAT 
ACCAGCGAGT TGGGGGTTGT AACGGCAGTT TTTTCCCATG CCGACGAGGG CGATAACGAT 
AATTATCAAT GCTCGGTGCA ATTACGCAAT TATAGTTTGC CCGATGGCAG CCCGTTTGAA 
TTACGCAAAG TGCCAGTTGC CACGCCCTAC CTTGGTTTAG CCTGTATTCC CAATGTTGGC 
GATTTGGTGG TGCTCTCGTT TATTGGCGGC GATATTAATG CGCCAATCAT TATGGGGCGG 
GTCTATAACG ATGAAGATCG TCCGCCGGCC AATAATCCCA AGGAGTTTTT GCTGCAACAT 
AGCATCGCCG AAGGTGGCAG TTTGCTGCTG GATAGCGAAG GCAAAATTAT CTTGACCAGC 
AAAAATGGCG AGAACACGAT TACGCTTGAA GATGAGAAAA TCGCCATCAG CAACGAGAAA 
TTTAGCTTGG TGATTGATCT TGCGGGTGAG AAAATTAGCC TTAGCTCCAA CAAAGATCTC 
AGTTTAATTG CTGAAACTGG CAAACTAACC GTCCAAGCCA ATGCAATTGA ACTTAAATCC 
GATTCAACCT TGGATCTACA GGCTAGCGGC GCGATTAAGA TCAAAGGTAG CACGATCGAT 
TTGAACTAA
 
Protein sequence
MEELLQIIQR VAERSTQRIH TSELGVVTAV FSHADEGDND NYQCSVQLRN YSLPDGSPFE 
LRKVPVATPY LGLACIPNVG DLVVLSFIGG DINAPIIMGR VYNDEDRPPA NNPKEFLLQH 
SIAEGGSLLL DSEGKIILTS KNGENTITLE DEKIAISNEK FSLVIDLAGE KISLSSNKDL 
SLIAETGKLT VQANAIELKS DSTLDLQASG AIKIKGSTID LN