| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1661 |
|---|
| Symbol | |
|---|
| ID | 5733545 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 1929522 |
|---|
| End bp | 1930415 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641278800 |
|---|
| Product | transporter DMT superfamily protein |
|---|
| Protein accession | YP_001544432 |
|---|
| Protein GI | 159898185 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2962] Predicted permeases |
|---|
| TIGRFAM ID | [TIGR00688] rarD protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGGG GAATTCTCTA CGCTGCCGGG GCTTATGCAT GTTGGGGATT TTTCCCGCTC
TACTGGAAGT TGTTGAACGG CATTCCAGCG TTGGAAATTT TGGCGCATCG CATGGCATGG
TCGTTGGTGT TTGTGGGTCT GTTGGTAGTT CTTCGCGGCC AAATGGGCCA ATTTTTGCAG
GTGTTGCGCA ATCGTCGCAC AGTGTTAATC TATGCGACCA GCGCTTTTTT GCTCGGCATC
AACTGGTATG TCTACATCTG GGCGGTCAAT GCCAACCATG TGGTCGAAAG TAGCCTTGGC
TATTTTATCA ACCCTTTGGT CAACGTCGCG CTGGGCATGT TGTTTTTGGG CGAACGCGTG
CGACGCTGGC AGGCTATGGC GATTGGTTTG GCCACCATCG GCGTGGTCTA TCTTACCGTG
GCATTGGGTG TGTTGCCATG GATCGCCCTA GCCTTGGCGT TTACCTTTGG ATTTTATGGC
CTAATTCGCA AAACTGCCGC GTTGGATTCG CTGCAAGGTC TCGCGTTGGA AACAGTCGTC
TTTTTCGGGC CAGCGGCGGG CTATTTGCTC TGGCTCGAAA CCCAAGGCAA AGCCGCTTTT
GGCCATCAAT CGTGGACGGT CAGCTTGATT TTGGCCGGCG CAGGCATTGT GACAGCGATT
CCATTGTTGA TGTTTGCCGC TGGTGCACGC CAAATCCCCA TGACGACCTT GGGTTTATTG
CAATATATCA ATCCAACCAT GCAATTCAGC CTTGGTGTGT TGCTCTACCA TGAGCCAATC
TCAGGCACAA AATTGATTGG TTTTGCAATT ATTTGGATTG CCTTAGCATT GTACAGCTTC
GAAAGCTATC TCAATCGTGG TCAAATTGCG AAGCCAGCAG CTCAGAGCAG TTAA
|
|---|
| Protein sequence | MKRGILYAAG AYACWGFFPL YWKLLNGIPA LEILAHRMAW SLVFVGLLVV LRGQMGQFLQ
VLRNRRTVLI YATSAFLLGI NWYVYIWAVN ANHVVESSLG YFINPLVNVA LGMLFLGERV
RRWQAMAIGL ATIGVVYLTV ALGVLPWIAL ALAFTFGFYG LIRKTAALDS LQGLALETVV
FFGPAAGYLL WLETQGKAAF GHQSWTVSLI LAGAGIVTAI PLLMFAAGAR QIPMTTLGLL
QYINPTMQFS LGVLLYHEPI SGTKLIGFAI IWIALALYSF ESYLNRGQIA KPAAQSS
|
|---|
| |