| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1607 |
|---|
| Symbol | |
|---|
| ID | 5733509 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 1865631 |
|---|
| End bp | 1866698 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641278746 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001544378 |
|---|
| Protein GI | 159898131 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACAA CAGAACCAAC TATCACCAAG AAACCAACGA GCGATCAAGC GTTACTTTCG
CGCAAGCCGC GTTCGCTCTG GAGTGATGCT CGGCGGCGGC TGTTTAGTAG CACGGTTGGC
CGTTTGGGAA TGCTGATTTG TGCTTTTCTG TTTGCAGTTG CAATTATCAC GCCCTTGGTA
CAACCGCTTG ATCAGACGCT CAACCGTGAT ACCGCCAACA AACTCCAACC GCCATCATGG
TTGATGACCG CCGAAGAACG GGCCGATGCT GCTAGCAAAA GCATCGACAA AGCCCGCAAA
GATATTCCGT GGGGCAGATT TGAACGGCCA TTCGGCACCG ATCAATTAGG TCGCGATATC
TTTATTCGGG TGTTGCATGG TGCGCCGATT TCGCTAACGG TGGGCACATT TGCGGTGATA
TTGGCGGTAA TTTTTGGCTC GTTGCTAGGC TTAATTTCGG GCTTTTTCGG CGGCATTATT
GACACCATTG CCACCTGGCT GATGGACATT TTGCTGGCGT TTCCCTCAAT TCTCCTCGCG
ATTGCTTTGA CCGCGATTAG CAATAACCGT GAATCGTTTT CGTATAAATT TAGCCAACAA
ATTACCGAAC TGCCAATTTT GCAAACGATT TTTGACCCAC CGTTGTTCAA TGCAATGTTG
GCGGTAGCAG TCGTCGAAAT TCCAATTTTT GGGCGGATTG CCCGTGCAGC GGTGTTGAGT
GTGCGCAATC AAGAGTATAT TCATGCTGCC GAGGCGGTTG GGGTGAGCCG AATGCGTATG
TTGATGCGGC ATATTTTGCC CAATAGCTTA ACCCCAATTT TGGTGCAAAT GACCTTGAGT
GTGGCCTCAT CGATTACTAG TGTAGCAGCC TTGGGATTTT TGGGGCTGGG CGCACAACCA
CCACGGCCTG AATGGGGTTC GATGCTTTCG ACCGCCCGTG AATATGTGGG CACTGGCCAA
TGGTGGTATG CCTTGTTTCC CGGGATTGCG ATTATGCTGA CTGTGTTGGG TTTTAATTTG
CTTGGCGATG GTTTGCGCGA TGCCCTCGAT CCGCGGCTGA AGCATTAA
|
|---|
| Protein sequence | MATTEPTITK KPTSDQALLS RKPRSLWSDA RRRLFSSTVG RLGMLICAFL FAVAIITPLV
QPLDQTLNRD TANKLQPPSW LMTAEERADA ASKSIDKARK DIPWGRFERP FGTDQLGRDI
FIRVLHGAPI SLTVGTFAVI LAVIFGSLLG LISGFFGGII DTIATWLMDI LLAFPSILLA
IALTAISNNR ESFSYKFSQQ ITELPILQTI FDPPLFNAML AVAVVEIPIF GRIARAAVLS
VRNQEYIHAA EAVGVSRMRM LMRHILPNSL TPILVQMTLS VASSITSVAA LGFLGLGAQP
PRPEWGSMLS TAREYVGTGQ WWYALFPGIA IMLTVLGFNL LGDGLRDALD PRLKH
|
|---|
| |