| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1249 |
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| Symbol | |
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| ID | 5733127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 1457794 |
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| End bp | 1459932 |
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| Gene Length | 2139 bp |
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| Protein Length | 712 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641278389 |
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| Product | PKD domain-containing protein |
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| Protein accession | YP_001544025 |
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| Protein GI | 159897778 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.8229 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCGTT GGATTATTAT CGTTGTTCTG ATCTTTTCAG GTTTTTCTGC CCAATTTGTT
CAACAATCGA ACCCTGAGCT TTCCCCTGCT GCTGTTCCTG CTGGCTTCAC CCAAACTGTG
GTTGTACCCT CGAATAGCCT TGATGCTCCA ACTGCCTTTA CTTGGTTGCC CTCTGGTGAG
ATGTTGATTA CTCAGCAAAA TGGTCAGTTG TTGGGTTGGA ATGGCACAAG CACGCGCACC
GTAATGAGCC TTGGCAATCG AGTTTGTTAC GATTTTGAGC GTGGTTTGCT GGGCATCGCG
GTTGATCCCC AATTTACCAG TGGTCGTCCA TATGTCTATG TCTACTATAC CTTTAATAAA
TTTAACCAAA CTTCGAACAA TTGCCCTCGC CAAAGCCCCA GCACCAATCC GGTCAATCGA
GTTTCACGCT TTACTTGGAG TAATAATGTG CTCGATATCA ACTCGGAATC GGTCTTGATC
GACAATATTG GCTCATATAA CGGCAATCAC AATGCTGGCG ATCTTGGCTT TGGCAAAGAT
GGCAAGTTGT ATATCAGCGT TGGCGATGGC GGTTGCGATT ATCTCGATAG TGGCTGTGGT
GGCGCAAACG ATGCCTCGCG CGAACAGCAC ACCTTGCTTG GCAAAATTTT ACGCATCAAT
GCTGATGGTA CGATTCCTAG CGATAATCCG TTTACTGGCA GCGGCACGGC CCGTTGTAAT
ACTGGCTCAG TGGCTAGCGG CACGATTTGC CAAGAAACTT GGGCTTGGGG TTTTCGCAAT
CCCTACCGTA TAACCTTCGA TCCCAATGCT AGCGGCGTGC GCCTGTTTGT CAACGATGTT
GGCCAAAATG TGCGCGAAGA AATCGACGAA GTTGTGGCGG GCAAGGATTA TGGCTGGAAT
TGTCGCGAAG GTACGCGGGT CAATAATTCA ACGGGGCCAT GTTCGCCAAC GCCCGCCAAT
ATGGTTGACC CAATTTATGA ATATAGCCAT GGCAACGCTG GCGCACCATT TACCAACTGT
AATTCGATCA CTGGTGGCGC GTTTGTGCCT GCCAATACTT TTCCTAGCAA TTACAGTGGT
TATATGTTTG GCGATTATGT TTGCGGCAAG ATTTTTATGA TTTCAGCCCA AGCGCCCTAC
AATTCGGTTC TAACTTTCTC AGATGATCCT GGATCAGTCA CGCATATGGC GTTTGGCCCG
AATGGCGGTC GCCAAGCGTT ATTCTATGCG ACCTATGCTA ATGGTGGCGA GATTCGCCGA
ATTAGCTATG ATGGTAGCAC CAGCTTGAAT TCTTCGTTTA CAGCCAACCC CAGTTTTGGC
GCGGCTCCCT TGGCCGTAAC CTTTACCGCT AGCAATCCAA GCAGCGGCGC AAGCTATTTG
TGGAATTTTG GCAATGGCAC GAGCCGCGAA ACTAGCACGG CCAGCACATC CTACACTTAC
GCCAACAATG GCACCTACAC TGCAACCCTG TATTTGCGCG GCAGCAATGG CGATTTATCG
AATGTGAGCC AGGCGATTGT GCGGGTTGGC GCAACTGCGC CGAACGCCAG CATCACCCAA
CCAAACTCAA GTGCCCAATT TGCGGTTGGC CAAACAATCC AAGTGCGGGG GCAGGCCAGC
GATGCCGAAC AAGGCCAATT GCCAGCCAGC GGTTTATCGT GGAAAGTAAT TTTGCATCAC
GATACCCATA CCCACCCCTA TTTGACCCAA CCAACCACCA ATAGTTTTAG CTTTACTGCG
CCAGCCCCCG AAGATTTATT GGCGGCCAGC AACAGCTATT TGGAGCTTGA GCTGACTGCG
ACTGACGATA GTGGCTTGAG CCATGTTGTT ACCCAAACTA TCCAGCCCCA TAAAGTCAAT
GTGACCTTGG CCTCAACCCC GAATGCTAAC GCCAACTTTG TGGTCAACAA CGACCCGATC
GAAGCTGATG ATCCGTTTAT TTCGTGGGAA AACTACAGCC TACGCGTGAC TGCACCAGCC
TATGCTGATA GCAATCGTTG GTGGCGTTTT GTGCGTTGGA GCGATAACAA CACCAGCAAT
CCGCGCACCT TTACGACACC TGCCAGCGCT ACGACTTACA CCGCGGTCTA CGAAGAATTT
ATCCCCTATC AGCTCTATTT GCCAGTTGTG CGCAAGTAA
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| Protein sequence | MSRWIIIVVL IFSGFSAQFV QQSNPELSPA AVPAGFTQTV VVPSNSLDAP TAFTWLPSGE
MLITQQNGQL LGWNGTSTRT VMSLGNRVCY DFERGLLGIA VDPQFTSGRP YVYVYYTFNK
FNQTSNNCPR QSPSTNPVNR VSRFTWSNNV LDINSESVLI DNIGSYNGNH NAGDLGFGKD
GKLYISVGDG GCDYLDSGCG GANDASREQH TLLGKILRIN ADGTIPSDNP FTGSGTARCN
TGSVASGTIC QETWAWGFRN PYRITFDPNA SGVRLFVNDV GQNVREEIDE VVAGKDYGWN
CREGTRVNNS TGPCSPTPAN MVDPIYEYSH GNAGAPFTNC NSITGGAFVP ANTFPSNYSG
YMFGDYVCGK IFMISAQAPY NSVLTFSDDP GSVTHMAFGP NGGRQALFYA TYANGGEIRR
ISYDGSTSLN SSFTANPSFG AAPLAVTFTA SNPSSGASYL WNFGNGTSRE TSTASTSYTY
ANNGTYTATL YLRGSNGDLS NVSQAIVRVG ATAPNASITQ PNSSAQFAVG QTIQVRGQAS
DAEQGQLPAS GLSWKVILHH DTHTHPYLTQ PTTNSFSFTA PAPEDLLAAS NSYLELELTA
TDDSGLSHVV TQTIQPHKVN VTLASTPNAN ANFVVNNDPI EADDPFISWE NYSLRVTAPA
YADSNRWWRF VRWSDNNTSN PRTFTTPASA TTYTAVYEEF IPYQLYLPVV RK
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