Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_1168 |
Symbol | |
ID | 5733061 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 1340810 |
End bp | 1341574 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641278308 |
Product | hypothetical protein |
Protein accession | YP_001543944 |
Protein GI | 159897697 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00022573 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCTTGT TGATGTTATG CGGGTTTGCC TTGTTGGCGG GGTTTATTGA TGCGGTGGCT GGTGGTGGTG GCTTAATTCA ACTGCCACCC TTGTTGATTA CCCAAAAAGA TATTGCTCCA GCCTTTATCC TGGGAACCAA TAAATTTGCC GCAGTCACGG GCACGGCCAC GGCAGCGGTC AGTTACAATC GGCGGGTCAA AGTCAATTGG CAAATTGTCG TGCCAGGTAT GTTTAGTGCG GCAATTTGTT CGTGGCTGGG GGCGCGAGCT GTCAGCTTGA TTCGGCCAGA GCTTTTTCGG CCAATCATGT TGGTGTTGAT TATCGCCATG GCAATCTATA CCTTTAAACG CAAAGATTTT GGTAGCGCTG CCCGCGAAAC CAAAGCCTCA ACCAAACCAA TTCCTTATGT TTTGTTTTTT TGTGGCTTGA TTGGTTTTTA TGATGGAATT TTCGGGCCTG GCACTGGCAG TTTATTGATG TTTGCTTTTG TGGGCATTTT AGGCTTCGAT TTTTTGCAAG CCTCAGCCAC CACCAAAATT ATTAATGTAA CCACCAACGT CGCAGCTTTG GTGCAATTTC TGGGTGCAGG CCAAATTATC TGGCATTTGG CTGTACCGAT GGCGGTTTGC AATATTGTGG GCGGCATCAT CGGCTCGCGT ATGGCCATGG CCAAAGGCAG TCAGTTTGTG CGCGTGATCT TTTTGGTGGT CGTAGTTGGG GTGATTTTGC GCTATAGCTA CGATATCATT CAAGAATTTA TGTAA
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Protein sequence | MTLLMLCGFA LLAGFIDAVA GGGGLIQLPP LLITQKDIAP AFILGTNKFA AVTGTATAAV SYNRRVKVNW QIVVPGMFSA AICSWLGARA VSLIRPELFR PIMLVLIIAM AIYTFKRKDF GSAARETKAS TKPIPYVLFF CGLIGFYDGI FGPGTGSLLM FAFVGILGFD FLQASATTKI INVTTNVAAL VQFLGAGQII WHLAVPMAVC NIVGGIIGSR MAMAKGSQFV RVIFLVVVVG VILRYSYDII QEFM
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