| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0877 |
|---|
| Symbol | |
|---|
| ID | 5732778 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 997928 |
|---|
| End bp | 999154 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641278009 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001543653 |
|---|
| Protein GI | 159897406 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAAAC AACAAATGGC AACCGGATCA AACACGTCGG ATTTGAACAA CCTGATCGTT
AATCAATCCT TCCAAGATAT TGCGGAACGC TTCCGCTTTG GTGCACCTCC GGTCTCCCAC
CTGGCCAATT TTGATGCCCG TAGTGATGCT GAATTGCTGA AGGCTGCTGC TGATCATCCT
AGTGCCTTGG AGCGCGAACG CGCACTCTGG GAATATGCTC ATCGTAATCA AAAGGCTGCT
TTAGCTGTTT TGAGCAATCA CCTTAACATT GAAAGTGACC CATCAGTCCG CTGGAATTTG
CTCTGGTTGA TGGTTAAGGT CGGCGAAGAT GCAGCCGTAC CAGCGTTAAC TGCTGCCTTG
AGTGATCCCC ATAGCGAAGT CCGTGACTGG GCGACCTTGT TTCTCGAAGA ATTAACAGGT
CAAGAATATC CGATGGTCTA CAACGAAGTT CAATATGAAA ATGATCGCAC CTTCGACCAA
ACCTTGCCAT TGCAAATTGC AGGCTTTGCC GATGTGAATG TTCCTGGCAT GGGTTGGGTA
CAGGCCCGGC TCTCACCTCA ATGGTTTTCA TCAATCCTTG GTCGGGTATT AGCTTGTACC
AATAGCTCAA GCTTTATGAG CGATCTAGTG ATTGAGAAAG AACTGTTGAA CTACCATGAA
GATGGCAGCA ACCACTACGA AACCTTTATG TTCCGTGGCG CTTCCTACCC TATCACCGAT
ACCGTAACCC AGCACATCTA TGAATCGAAC ACGATGCGCC CATTCTATCA ATCGGGCAAA
GTTAAAGTTG GGGCACCGAT TGTTACTCCT GTATCGTTGG CTCGTGCTGC TGGTACCGAG
CGCCTACGCC CTGGCAAACT CAAAGAAATG AACATGCATG CCTCAGATGG AGTCGAGGGC
GCACGTGGCG AACGCTTGCG CGAAGTTGGG ATTGTGCGCA GTGTGCGTGG TCGTTTCTGG
GGCTGGGCCC ACACTGATCT TAATCGCTAC CTTGAAACGG GGATTATTGC CCCTGGTAGC
GTGCAGTTGG TAAGCACCGC TGATCCCGTC GTTGGCAAGA TGGCTAACAC CGTGATCTAC
GGAACTTTCC GTGGTAAGCT CGGCGATCTA ACTGGCGATG GCAAACTCAA TGTGAATTTG
ATTCCTTGTC ATGGCACCAT CAATGGCGAA CTTGACCTGA ACTGTGATGG CATTGCTGAC
GAAGATCCTC GGATTCCTCG CGCATAA
|
|---|
| Protein sequence | MLKQQMATGS NTSDLNNLIV NQSFQDIAER FRFGAPPVSH LANFDARSDA ELLKAAADHP
SALERERALW EYAHRNQKAA LAVLSNHLNI ESDPSVRWNL LWLMVKVGED AAVPALTAAL
SDPHSEVRDW ATLFLEELTG QEYPMVYNEV QYENDRTFDQ TLPLQIAGFA DVNVPGMGWV
QARLSPQWFS SILGRVLACT NSSSFMSDLV IEKELLNYHE DGSNHYETFM FRGASYPITD
TVTQHIYESN TMRPFYQSGK VKVGAPIVTP VSLARAAGTE RLRPGKLKEM NMHASDGVEG
ARGERLREVG IVRSVRGRFW GWAHTDLNRY LETGIIAPGS VQLVSTADPV VGKMANTVIY
GTFRGKLGDL TGDGKLNVNL IPCHGTINGE LDLNCDGIAD EDPRIPRA
|
|---|
| |