| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0715 |
|---|
| Symbol | |
|---|
| ID | 5732630 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 821299 |
|---|
| End bp | 822108 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641277845 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001543491 |
|---|
| Protein GI | 159897244 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.965054 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACATCGC AACAAAAGGT CGTGCTCATC ACAGGCGCAT CATCGGGGAT TGGGCAAGCA
ACAGCGGAAC TGCTAGCAGC CCATGGCTTT CGGGTCTTCG GCACGAGCCG CAACCCGATT
TCGAACAAGC ACTCATTTAC TTGGCTACCG CTGGATGTCC GCTCGGACGA CTCGGTGCAT
GCCGCAGTTC AATCGCTGCT AGGCCAGACT GGACGACTTG ACATCCTCAT CAATAATGCA
GGTTATGTGC AGTTTGGTGC GGTTGAGGAG AGTAGCATTG CCGATGCGCA AGCTCAGTTC
GACACCAATC TGTTCGGTGT TATTCGCATG ATCAAGGCGG TAATGCCGAT TATGCGACAA
CAAGGCAGCG GACGCATTAT CAATGTTAGC TCAATTGTCG GGCACATCGC GCCTCCATAT
GGTGGCCTGT ATAGTGCGAG CAAATTTGCC CTAGAAGGCC TGAGCGAATC TCTTAGCGCC
GAGGTTCGGC AGTTTGGCGT GAGCGTCTCA CTAGTCGAGC CAAGCTATGT GAATACCCCG
ATTGTCACCC AGCCGCCGAC TACCCTGATT AATGACTATA CCCTTGGTCG TCAGCGTGCG
CAGCAAAGCC TCGCCACAAA TGCTAAGCAG GGGCTGGAGC CTGGCACGGT GGCTCGCGTA
ATCCTGCAGG CCGCAACTAG CAAACCCCGT CTGCGCTATC CCGTTGGCGT GGATGGAACC
ATCGCCCTGA TGCTCCAGCG TGTGCTCCCC GAAGCAGTAT TTGAGGCATT CAAACGCCGT
CTGTTCAGCG GTGACAAGAC CGCTGCCTAG
|
|---|
| Protein sequence | MTSQQKVVLI TGASSGIGQA TAELLAAHGF RVFGTSRNPI SNKHSFTWLP LDVRSDDSVH
AAVQSLLGQT GRLDILINNA GYVQFGAVEE SSIADAQAQF DTNLFGVIRM IKAVMPIMRQ
QGSGRIINVS SIVGHIAPPY GGLYSASKFA LEGLSESLSA EVRQFGVSVS LVEPSYVNTP
IVTQPPTTLI NDYTLGRQRA QQSLATNAKQ GLEPGTVARV ILQAATSKPR LRYPVGVDGT
IALMLQRVLP EAVFEAFKRR LFSGDKTAA
|
|---|
| |