| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0540 |
|---|
| Symbol | |
|---|
| ID | 5732398 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 625020 |
|---|
| End bp | 625898 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641277667 |
|---|
| Product | UBA/THIF-type NAD/FAD binding protein |
|---|
| Protein accession | YP_001543316 |
|---|
| Protein GI | 159897069 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAATGC TCAGTTTTGA GCCTATTGCC CCGTTTGTAA TAGGAAACCA GTCACGCTTT
CATATCACTA TTGTTGGGGC TGGTGGTACT GGCTCTTATA TCGTGCAAAC TGTGGCTCGG
TTAATGGCGC ATGCCAATGA GAAGGGTTCC CCCAAAATCG ATGTAACGCT GGTTGATGGC
GATACAATTG AAGCAAAAAA TATTGGTCGT CAACTCTTTG CCCCAGCCGA AATAGGCCGA
AATAAAGCAC AATCATTGGC TACTCGGTTC AACCAAGCCC TAGGCCTCAA AATACAAGCT
ATACCCACAA TGATCGATCA ATATTCGCTT CCGCATGTTG ATCGCTATCA ATGGCATCAA
TCGGCTGCGC TTGATAAGCG GCCCTACTCA ATTGTTGTGG GCGCTGTCGA TAATGCCGAA
GCACGCAAGG TTATTCATGA TGGTTTAGCT AAATATGTCT TTAACCTATG GATTGATAGT
GGCAACCACG AGCATGGGGG ACAAGTGCTT GTAGGCAACT GCGTAGCACC GCATAAGCTA
AAAGGAAGCT TTGCCCTTGA GGGAATGGTG CAATCATTAC CAGCACCATC GTTGATGGCA
CCATCGCTGA TAACACCACC AGAGCCACTG CCTGAATCGC AGCAGCTTGA TTGTGCAACC
GCGATGGAGA ATAACCGCCA ATCCTTACTT ATTAATCAGC AAATGGCCTC AATTGTTGGC
CAATACTTAC ATCAAATCAT CTTTACCCAA CGCTTGACCA CTTTTGAAAC AATTGTCGAT
ATGAGCACAC TCACGATGCG AAGCACCCCA ATCACGGTTT CTAATGTGGC TCAATGTCTT
GGGGTAACGT CTGCATTTTT AAAAGGAATT AACGCATGA
|
|---|
| Protein sequence | MQMLSFEPIA PFVIGNQSRF HITIVGAGGT GSYIVQTVAR LMAHANEKGS PKIDVTLVDG
DTIEAKNIGR QLFAPAEIGR NKAQSLATRF NQALGLKIQA IPTMIDQYSL PHVDRYQWHQ
SAALDKRPYS IVVGAVDNAE ARKVIHDGLA KYVFNLWIDS GNHEHGGQVL VGNCVAPHKL
KGSFALEGMV QSLPAPSLMA PSLITPPEPL PESQQLDCAT AMENNRQSLL INQQMASIVG
QYLHQIIFTQ RLTTFETIVD MSTLTMRSTP ITVSNVAQCL GVTSAFLKGI NA
|
|---|
| |