Gene Haur_0484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0484 
Symbol 
ID5732383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp562767 
End bp563969 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content37% 
IMG OID641277610 
Productserine/threonine protein kinase 
Protein accessionYP_001543263 
Protein GI159897016 
COG category[R] General function prediction only 
COG ID[COG4248] Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGACTT TTAGCTATCG AACCAAACAG CATATCCATG TTCAACTTGA TCAGCTGAAT 
CCGCTTGGTA AGGGTGGCGA AGGTAGTGTC TATTCTGTTA TCAATACGCC GAACTACCCT
AATCACTGTG CAAAAATTTT TCATCCTAAC CGATTAACTG CTGATTTAGA GCGAAAAATT
AACTTTATGG TCGATAATCA ACCTTCAACT CTCATAAGTA CAAATTATCG GATTGCTTGG
CCGATTGCTT CGTTATATCA CAATAAAAAA TTCTATGGTT TTATTATGCC AAAAGCATTT
GATAAAAGTA TTGGCCTTGA GCGTGTAACT CAACCTCAGA TTAGCCTCAA AGGTATTGAT
ACTCAATGGA TTAAATATCA GCGCAATGAT AAACAAGGGA TGATTAATTG TTTTAAAGTT
TGTGTAAATA TTGCCTTCAT TGTTAACCTT ATTCATCAAA TGAAAAAATA TACCTTTGTT
GATCTAAAAC CTCAAAATAT TTTAGTTAAC CTCAATGGTT TTGTATCGAT TACCGATATT
GATTCGATGC AAGTGTATGA TCCTCAGAAA AATCTGTATT ATAAATCTGT AGTTTCTACT
GCTGAATACT CGCCACCTGA ATATCAAAGC TACTTGAAAA AAGGAGGAAA TATCACACAA
GAATGGGATA ATTTTTCGAT GGCAGTAATT TTTTATCAAT TAATGACCGG GGTTCACCCG
TTTGCCGCAA CATTTGGTGG TAAATTTAGT AATTCAACAA CAATTGATGA TCATATTAGC
CAAAGCTTAT TTGTATTTGG AGATAATCGG CAGACAATAA CGAAATTGCC ACCATTACAT
ACATATTATC AGCAAATTCC ATTGAATATT CAACAATTAT TTTTACGAGC ATTTGATAAA
CCAGTCAGCC AGCGCCCAAC TGCCGAAGAG TGGGGGCAGA ATCTATTTGA GTTAGTTTCT
AAGGATTCGC ATTTGATCGC ATCGAACACA GCAGTTGCGG CGCTGGCATT ACCAGTAAAA
TCAGCCTTGA AGCCGGCTGC TCAATCAACA ACTGGCCATG TTCAGATGTT CCAATTAACG
AAGGCTTCCA CTCATAGTCA GGGGTCTCAA TCAACGAAAG CTCCACATAA GAGTTATGCT
TGGGTTGGTT GGCTGATTGT GCTCGTTTGT ATTATTGTGG TGATTGCTGT TGCCAACGCC
TAA
 
Protein sequence
MMTFSYRTKQ HIHVQLDQLN PLGKGGEGSV YSVINTPNYP NHCAKIFHPN RLTADLERKI 
NFMVDNQPST LISTNYRIAW PIASLYHNKK FYGFIMPKAF DKSIGLERVT QPQISLKGID
TQWIKYQRND KQGMINCFKV CVNIAFIVNL IHQMKKYTFV DLKPQNILVN LNGFVSITDI
DSMQVYDPQK NLYYKSVVST AEYSPPEYQS YLKKGGNITQ EWDNFSMAVI FYQLMTGVHP
FAATFGGKFS NSTTIDDHIS QSLFVFGDNR QTITKLPPLH TYYQQIPLNI QQLFLRAFDK
PVSQRPTAEE WGQNLFELVS KDSHLIASNT AVAALALPVK SALKPAAQST TGHVQMFQLT
KASTHSQGSQ STKAPHKSYA WVGWLIVLVC IIVVIAVANA