Gene Haur_0482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0482 
Symbol 
ID5732381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp560607 
End bp561275 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content42% 
IMG OID641277608 
Productvon Willebrand factor type A 
Protein accessionYP_001543261 
Protein GI159897014 
COG category[R] General function prediction only 
COG ID[COG4245] Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATACG GATTAGAAAG CCCAATCAAC TACGAACAAA AATGTCTGTG CATTCTAGTT 
GTTGATACAT CAGGATCGAT GCAAGGCAGG CCTATTGATG AATTGAATCA AGGTTTACAA
GTATTTCATC AAGATATTAG CAATAGTTTT TCAACTGCCC AACGACTAGA AATCTGCCTT
GTTGAATTCA ATAGTCAAGC TGATTGTATT GTTGAGCCTA GCTTAGTCGA TCAATTTCAT
ATGCCGATTT TGGCTGTTGC TGGCACAACC AAGTTGGTTG ATGGGGTTAG GCTAGCGATT
CATAAAGTCC AGGAACGCAA AAGCTGGTAT CGTTCAACCG GACAACCCTA TTATCGGCCT
TGGATTATTT TAATGACTGA TGGTGAGCCA GATAGCGATC AAGATGTGGC TGGCTTGGCG
CGTGAGATTC AGCATGGGGT CAACAATAAA CAATTTGTCT TTTTTCCAAT TGGGGTACAA
GGGGCTGATA TGCGTATGTT GCAACAGATT AGCACCCCTG ATCGTCCTCC GATGCTGTTG
CAAGGTTTAC GCTTTGAAGC ATTTTTTGAC TGGTTAAGTG CAAGCCTATC AATGGTTGCC
AGTTCAACTG ATGGTCAAGT TATTCAGTTA CCATCAACAA GCGGTTGGGG AATTCTTCCC
GTATCCTAA
 
Protein sequence
MEYGLESPIN YEQKCLCILV VDTSGSMQGR PIDELNQGLQ VFHQDISNSF STAQRLEICL 
VEFNSQADCI VEPSLVDQFH MPILAVAGTT KLVDGVRLAI HKVQERKSWY RSTGQPYYRP
WIILMTDGEP DSDQDVAGLA REIQHGVNNK QFVFFPIGVQ GADMRMLQQI STPDRPPMLL
QGLRFEAFFD WLSASLSMVA SSTDGQVIQL PSTSGWGILP VS