Gene Haur_0351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0351 
Symbol 
ID5732261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand+ 
Start bp421892 
End bp422866 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content50% 
IMG OID641277474 
ProductABC transporter related 
Protein accessionYP_001543130 
Protein GI159896883 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1125] ABC-type proline/glycine betaine transport systems, ATPase components 
TIGRFAM ID[TIGR01186] glycine betaine/L-proline transport ATP binding subunit 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.0304446 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCACAA TCGAGTTTCG CAATGTTCGT AAAATCTACC CCAAGGCCGC AACCGCCGCG 
CTCGCCGATA TTTCTCTGAC AATCAATCGC GGTGAATTTG TGATTTTGCT TGGGCCTTCG 
GGCTGCGGCA AAACCACGCT CATGAAAATG ATCAATCGCT TGATCGAGCC AAGTAGCGGC 
ACAATTTTGC TCGATGGAGT CGATATTCAG TCGATTAATG CCACGAAATT GCGCCAGCAA 
ATTGGCTATG TGATTCAGCA AGTTGGGCTT TTTCCGCATA TGACGGTCGC TGAGAATATC 
GCAGTTGTCC CCAAATTGCT TGGCTGGCCC AAAGCCAAAA TCCAAAGCCG CATCGACGAA 
TTACTCCAGC TCATTCAGCT TGATCCTGCC CAATTTCGCC AGCGCTACCC GGCCCAAATT 
TCCGGTGGGC AAGCCCAGCG CGTTGGTTTG GCCCGTGCTT TGGCCGCTGA TCCTGGGGTG 
ATGTTGATGG ATGAACCATT TGGCGCGATC GATGCGATCA CCCGCACGGC CTTGCAAGAT 
GAGATGCTGC GCATTCAGCA GCAATTGCAG AAAACTATCG TTTTTGTGAC TCACGATGTT 
GAAGAAGCGC TTCGCTTAGC TGATAAAATT GCAATTCTGC ACGAAGGCAC GATCGTTCAA 
TACGATACTC CGCTCAATTT ATTGCGTAAT CCCGCTAATC ACTATGTCGC TGAGTTACTG 
GGAGCCGATG ATTTGGTGCG CCGTTTGAGT TTAATTCAGG TGCGCCATGT GCTTCAACCA 
CTGCCTGCAA GCTATGATTC CTCGTTAGCA AGCATCGAAA GTAGCCGCAA CCTGCGCGAT 
GGGCTGAATC AACTCCTCGC CAGCAGCGAC GAACAATTGT TGGTCGTTGA ACACAATCAA 
CCAATTGGTA TGCTCTCATT AGCCGCAATT CATGCCTATT TGCACCCTGA GGTCATCCAT 
GAACGACATC GTTGA
 
Protein sequence
MSTIEFRNVR KIYPKAATAA LADISLTINR GEFVILLGPS GCGKTTLMKM INRLIEPSSG 
TILLDGVDIQ SINATKLRQQ IGYVIQQVGL FPHMTVAENI AVVPKLLGWP KAKIQSRIDE 
LLQLIQLDPA QFRQRYPAQI SGGQAQRVGL ARALAADPGV MLMDEPFGAI DAITRTALQD 
EMLRIQQQLQ KTIVFVTHDV EEALRLADKI AILHEGTIVQ YDTPLNLLRN PANHYVAELL 
GADDLVRRLS LIQVRHVLQP LPASYDSSLA SIESSRNLRD GLNQLLASSD EQLLVVEHNQ 
PIGMLSLAAI HAYLHPEVIH ERHR