Gene Haur_0128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0128 
Symbol 
ID5732023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp159510 
End bp160454 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content52% 
IMG OID641277252 
Productdiacylglycerol kinase catalytic region 
Protein accessionYP_001542908 
Protein GI159896661 
COG category[I] Lipid transport and metabolism
[R] General function prediction only 
COG ID[COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase 
TIGRFAM ID[TIGR00147] lipid kinase, YegS/Rv2252/BmrU family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.976534 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAATG AGGCCACTTT GAAGATTAGC CTAATTATGA ATCCGGCTTC GGGTACGTCT 
GAGCAAGGTG CTTTGCTACT CGAAACCCTT GCGCCAATGA GTGGCGTGAC CATCTTAACG
ACCGATGCTG CTGGTGAAGG CGAACGTTTG GCGCGGCAAG CAGTGGCAGA TGGAGCTGAA
TTGGTCGTAG CGGCTGGCGG CGATGGCACG ATCAACGAGG TTGTTAAAGG CTTGATCGAA
GCTGAACGAC GGGTTCCATT GGGTATTATT CCGCTGGGCA CTGGCAACGA TTTGGCACGT
ACTTTGGCCT TGCCAACCGA TCCCTTGGAA GCTTGGAAAT TGATTTTGGT TGGCGAACGC
CGCAAGCTTG ACGTAATCGA GATTCGCACG CCGCGCGAAT TGCATTATGC CTTGAATGTA
TCGGCGGGCG GGTTTAGCGG CCAACTCAAC GAAGCCATGT CGAGTGAAGT TAAATCGGCA
TGGGGGCCGT TGGCTTATTT GCGGGGAGCC TTGGGCGTTT TACCTGATTT GACCAGCTAT
CGAACAACGA TTCAATACGA TGATCAAGCG CCTGAGCAAG TTGATGCGCT GAATATTATT
ATTGCCAATG GCCGAACCGC AGCGGCTGGA GTGCAAGTTG CTCCGTTGGC CAACCCCGAA
GATGGCCTGC TCGATGTAGT GATTGTGCAC TATGGCTCGA TTATGCAATT GGCGGGAGCA
GCGGCACGCT TATTGGTCAA TGGCAATTAT CTAAATAGCG AGTTGGTCGA GTTGCGGCGA
GCCAAAAAAG TGCAAGTTAT CTCTGATCCA GAAATTTGGT TCAACGCCGA TGGCGAATTA
ATTACCAACG AGCCAATTGT GTTTGAAGTG CTGCCTCAAG CCTTGGAAGT GGTGGTCGGT
GCTGAGTATC AAGCAGTCAT TGAGGATGTA ACGACAGGCA GCTAG
 
Protein sequence
MSNEATLKIS LIMNPASGTS EQGALLLETL APMSGVTILT TDAAGEGERL ARQAVADGAE 
LVVAAGGDGT INEVVKGLIE AERRVPLGII PLGTGNDLAR TLALPTDPLE AWKLILVGER
RKLDVIEIRT PRELHYALNV SAGGFSGQLN EAMSSEVKSA WGPLAYLRGA LGVLPDLTSY
RTTIQYDDQA PEQVDALNII IANGRTAAAG VQVAPLANPE DGLLDVVIVH YGSIMQLAGA
AARLLVNGNY LNSELVELRR AKKVQVISDP EIWFNADGEL ITNEPIVFEV LPQALEVVVG
AEYQAVIEDV TTGS