| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_1628 |
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| Symbol | |
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| ID | 6744460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | + |
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| Start bp | 1547081 |
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| End bp | 1548328 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 642751448 |
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| Product | RNA methyltransferase, TrmA family |
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| Protein accession | YP_002122287 |
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| Protein GI | 195953997 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00000158934 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAGTAG AAATTGAGAA ACTTGTTCAC AACGGCTACG GAATGGGAAG ATTTCAAAAC
AAGGTATATT TTGTGCCTTT TACCTTACCA AATGAAAAAG TTAAGATAAA AGATATTGTA
AACAAAAAAG ATTATTCTAT GGCTAAATTA GAGGCTGTTG TAGAACCAAG CCCACATAGG
ATAGAGCCCC TTTGTCCTTA CTTTGGAAGA TGCGGTGGAT GTCATTTCCA ACATATTGAT
TACACCGAAC AGCTAACCCA AAAATCAAAC ATCTTAAAAG AGACGTTAAA AAAGATAGGT
AACATAGAGA TAGAGAATTT AAACGGTATT ATCTACGATG AGCCTTATCA TTATAGAAAC
CGTGTTAAGT TTAAGGTTCG AAACAAAGAG CTTGGTTTTG TTGGTGTTGA TGAGGATTTT
GTAAAGGTAG AGCACTGCCC TATTTCTTCA AAAGCGATAA ACGATCTTAT GCCGTTTTTA
AAAGAGTTTG CCAAGCATTT TAATCCATCT TGGATAAGCG TATTTTATTC GGATACGCAA
AAAGAGTATA TGGTAAAGTT TGCCTCTTAC GATTATATAG ATAAGGAAAA GCTAAAGAAG
TTTAAAGAAC ATCTTACTCC TAAAAACGTC GTTGGTATAA CGCTTGTAAA GGATGATAAG
AGAGAAGATA AAATTATACT TTCAATAGGG ACTCCTTTTA CTTTTATTGA GCTTTTAAAA
ATAAAATATA GAATAAGTGT AAATAGCTTC TTTCAAGTAA ATATAAAAGT GGCTCAAAAA
CTTTTACAAA CGCTTTTAGA GAAAGAAAAT TATTTTGACA GAGTATTGGA TGATTATGGT
GGTGTAGGAC TTTTTGGCTT GCATTTGGCA AGACGCTCAG GCTCTGTTGA TATAGCTGAT
ATAAATAAAA GCTCAATAAA TGATGCCGAA TACTCAGCCA AGATAAACAA CATAAATAAC
GTGTCTTTTT ATGTCCAAAA CAGCTATGTC TTTTTGAAAA AAAGCCTATA TAAGCACGCA
AACCTTCTTG TTTTAGACCC CCCGCGTAGT GGTTTATCAA AGGAAGAGAT AGGGCTTATA
CTTCTTGGAA AACCAGATTA CATATGGTAT ATATCCTGTG AGCCTTCTTC TTTAGCAAGG
GATTTAAAGC TTTTAGGAAA AAAATATCAA ATAAAAGAAA TATATATGGC AGATATGTTT
CCACAGACTT ATCATATAGA AACTGCTGTT AAACTAGAGC TTGTATGA
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| Protein sequence | MIVEIEKLVH NGYGMGRFQN KVYFVPFTLP NEKVKIKDIV NKKDYSMAKL EAVVEPSPHR
IEPLCPYFGR CGGCHFQHID YTEQLTQKSN ILKETLKKIG NIEIENLNGI IYDEPYHYRN
RVKFKVRNKE LGFVGVDEDF VKVEHCPISS KAINDLMPFL KEFAKHFNPS WISVFYSDTQ
KEYMVKFASY DYIDKEKLKK FKEHLTPKNV VGITLVKDDK REDKIILSIG TPFTFIELLK
IKYRISVNSF FQVNIKVAQK LLQTLLEKEN YFDRVLDDYG GVGLFGLHLA RRSGSVDIAD
INKSSINDAE YSAKINNINN VSFYVQNSYV FLKKSLYKHA NLLVLDPPRS GLSKEEIGLI
LLGKPDYIWY ISCEPSSLAR DLKLLGKKYQ IKEIYMADMF PQTYHIETAV KLELV
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