| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_1620 |
|---|
| Symbol | |
|---|
| ID | 6744452 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Hydrogenobaculum sp. Y04AAS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011126 |
|---|
| Strand | - |
|---|
| Start bp | 1538265 |
|---|
| End bp | 1539077 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 642751440 |
|---|
| Product | Prephenate dehydrogenase |
|---|
| Protein accession | YP_002122279 |
|---|
| Protein GI | 195953989 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0287] Prephenate dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.908357 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTATA ACACTTTAAT AGTTGGTCTT GGTCTTATAG GAGGGTCGTT GGCTTTTGAT
ATTAAAAGCA AAAAACTATC AAAACACATA TACGCTTTGG ATAAAGACCA AAATACATTA
AACACTGCAA TAGAAAAAGG CATCATAGAT GGGGCGTTTA AAGAGGGTGT AAAATACGAT
TTTGTAATAT TTTGCAATCC AATATCCACT CTAGAAAATG CGGCTAAAGA GATAGAAAAA
CACACAAAAG AAGCCATAAT AACCGATGTA GCTTCTGTAA AAGAATATCC AGAGAGTGTT
TTAAAACCTA TCTTTAAAGA ATGTTATATA GGATCTCATC CAATAGCTGG TTCTCATAAA
AACGGTTTTG AAAATGCATC AAAAGATCTA TTTTCAAATA GACTAACGAT AGTTTGTCCT
ACGGATATAT CAAAAAAAGA GTATATAGAA AAAGTAAAAA GATTTTGGGA GCATGTAGGA
GCTAAAGTAG AGATTATGGA TGCAAAAACC CACGATGAGA TATTTGCAAC TACATCACAT
CTTCCACACC TAATAGCTTA CACTCTTACA AAGACATTAC CAGAAGAGTA CAAAAACTAT
GTAGGACAGG GCTTTTTAGA CACCACCAGA ATAGGTGCAA GCCAATCGGA ACTTTGGACG
GATATTTTTT TATACAACCA AGAAAATGTA TTAAAAAGTA TAGAGCTTTT CAAAAAACAG
TTAGATATGT TAGAACATAC GATAAAAGAT AAAAACAAAG ATCATCTCAA AAGTATGTTG
GACGAAATAT CAGAAAAAAG AAAAAGTCTA TAA
|
|---|
| Protein sequence | MFYNTLIVGL GLIGGSLAFD IKSKKLSKHI YALDKDQNTL NTAIEKGIID GAFKEGVKYD
FVIFCNPIST LENAAKEIEK HTKEAIITDV ASVKEYPESV LKPIFKECYI GSHPIAGSHK
NGFENASKDL FSNRLTIVCP TDISKKEYIE KVKRFWEHVG AKVEIMDAKT HDEIFATTSH
LPHLIAYTLT KTLPEEYKNY VGQGFLDTTR IGASQSELWT DIFLYNQENV LKSIELFKKQ
LDMLEHTIKD KNKDHLKSML DEISEKRKSL
|
|---|
| |