| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_1520 |
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| Symbol | |
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| ID | 6744351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | - |
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| Start bp | 1434800 |
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| End bp | 1435726 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 642751341 |
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| Product | pseudouridine synthase, RluA family |
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| Protein accession | YP_002122181 |
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| Protein GI | 195953891 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 58 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCAGA TAAAAATAAC CCCTGATATA GCCGGTGAAC GTATAGACGT TTTAATATCA
AACATATATA AAGATATATC AAGGGAGTAT ATAAAAAGGA TAATAAAAGA AAACGGTGTT
TTGATAAACG GTGAAAAGGT TTTTAAAAGC TCAAAAAAGG TTTTTGAAAA CGATGTATTA
GAGTTTGAAA TACCTCCTCC AAAAAAATTA GATGTAAAAG CCCAAGATAT ACATATAGAT
ATACTCTATG AAGATAACGA TTTGGCTGTG GTGGTAAAAC CCTCTGGCAT GCCTTCTCAT
ACAGGACCAG GACACGATGA AAACACGTTA GTAAACGCTT TACTTGCTAA GTTTGGAGAT
TTGTCTGTAA TAGGTGGGGT AGAAAGACCG GGCATTGTGC ATAGGCTTGA TAGATATACT
CATGGGCTTA TGGTAATAGC AAAAAACGAT GTCAGCCATC AAAAGCTATC TTTGATGTTT
AAAAATAAAG AGGTAGATAA ACACTATAAA GCTATAGTAT ATGGTATATC AAGGTTTAAA
GAGCAAACCA TAGAAACTTT TATAAGAAGA CATCCAACCA ACAGATTAAA ATTTGAAGTG
GCAAACGAGG GAAAACTGGC TATAACAAAA TACAGCTTAG AAAAACCTTT GAAAAATGCA
AGCTTGCTAG ACATAAAAAT ATACACTGGA AGAACCCATC AAATAAGAGT CCACATGTCT
TACATAGGAC ATCCTATCGT TGGGGATACG CTTTATGGCT ACAAGCACTC TTATTTTGAT
AAAACCCTTG AACATATGAT AGGTAAAAGG TTTTTGCTGG TGGCTTACAA GCTAAGCTTT
CTTCATCCTA AAAGCCAAAA ACCAATGGAA TTTGAGATAG ATATGCCAGA TTATTTTAAA
AACGTTTTAA AATATTTAGA ATCCTAA
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| Protein sequence | MPQIKITPDI AGERIDVLIS NIYKDISREY IKRIIKENGV LINGEKVFKS SKKVFENDVL
EFEIPPPKKL DVKAQDIHID ILYEDNDLAV VVKPSGMPSH TGPGHDENTL VNALLAKFGD
LSVIGGVERP GIVHRLDRYT HGLMVIAKND VSHQKLSLMF KNKEVDKHYK AIVYGISRFK
EQTIETFIRR HPTNRLKFEV ANEGKLAITK YSLEKPLKNA SLLDIKIYTG RTHQIRVHMS
YIGHPIVGDT LYGYKHSYFD KTLEHMIGKR FLLVAYKLSF LHPKSQKPME FEIDMPDYFK
NVLKYLES
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