| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_1443 |
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| Symbol | |
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| ID | 6744271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | + |
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| Start bp | 1364891 |
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| End bp | 1366021 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642751263 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_002122106 |
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| Protein GI | 195953816 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.000552485 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAATAT ATGTTAAAAT ATTATCTATG CCATTAAAAA GAGAGGGGTT AGAACGTTTT
TATATATTTG TTATAACTTT GGTTTTTCTT TTTATATCTT ATCAGCTTCA TGAAATTGAA
GTTAAACTTT CTAAGTCTAT AATAAATATC GTTTATAACC AAACCCAAGC TACAGTTTCC
AATATAGCTT TAAAAGTAAA CAACAAATCT TACAAGGAGC TTGACAACTA TCTTCCGCTA
TTGCTTTCAA AAGATATACA GAGAGTTTTT GTGCTTGCCT ATAAAAACGG TATTTTATAC
AGCGTAGAGG ACTTACCAAA ACATGGTATT AGCTACCCAC GGGTTTTTAT GCCAACTACA
GATGAAAAAT ATGTTATATT AAAAGCTATA AAAACTGATA TACCTTATGT AAAATACCAT
GATACTATAG AAAACGTGGG TTTTTCTCTT TACTACCCAC TAAACGTCTT GATACACGAT
AAACCCTATA AAGCATTGAT AATAATAGAT TATAAACTAA GCACGTTAAA TAGTCTAAAA
GATACCTTAG CGAGGATAAA AATAGGCATA ATACTTATCG ATATAATGTC GTTGTTGTTT
TTGCTGACTA TAATATTTTT GCTTTTCAAA ACAAGAGCTT ACAAAATAGA ATCTTATATA
GATGAACTTA CAGGTTTACC AAATAGAAAA CTACTTAAAA ATATAAAAAA CCGTCAAGAA
GATTACGTAG TTGCTATGTT AGATATTGAC TTTTTTAAGA GAATAAACGA TACGTATGGA
CACGATGCTG GGGACATAGT TCTAAAAGAG GTAGCTCAAG CTATAAAAAG CTCCATAAGA
GAAGATGATA TTGTTTTAAG ATGGGGCGGC GAAGAGTTTT TGATACTTTT AAAATGCAAA
CACCATGAGG CTTGTTTAAA GACTTTAGAG CGATTGAGGA TAAAAATAAA ATCTATTGAT
ATTAATATCA ACAATTACAA TATAAAACTT AGCGTATCTA TAGGGATATG TTTAAAAGCT
AAAAACTTGG ATGAAGGTAT TAAAAAAGCC GATGAAGCTC TTTATAAGGC AAAAAGAAGC
GGCAGGGATA GAATAGAGAT TTATGACGAT AAAAAAGCTA TTACTTTTTA G
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| Protein sequence | MLIYVKILSM PLKREGLERF YIFVITLVFL FISYQLHEIE VKLSKSIINI VYNQTQATVS
NIALKVNNKS YKELDNYLPL LLSKDIQRVF VLAYKNGILY SVEDLPKHGI SYPRVFMPTT
DEKYVILKAI KTDIPYVKYH DTIENVGFSL YYPLNVLIHD KPYKALIIID YKLSTLNSLK
DTLARIKIGI ILIDIMSLLF LLTIIFLLFK TRAYKIESYI DELTGLPNRK LLKNIKNRQE
DYVVAMLDID FFKRINDTYG HDAGDIVLKE VAQAIKSSIR EDDIVLRWGG EEFLILLKCK
HHEACLKTLE RLRIKIKSID ININNYNIKL SVSIGICLKA KNLDEGIKKA DEALYKAKRS
GRDRIEIYDD KKAITF
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