| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_1396 |
|---|
| Symbol | |
|---|
| ID | 6744221 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Hydrogenobaculum sp. Y04AAS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011126 |
|---|
| Strand | - |
|---|
| Start bp | 1309768 |
|---|
| End bp | 1310790 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 642751213 |
|---|
| Product | high-affinity nickel-transporter |
|---|
| Protein accession | YP_002122059 |
|---|
| Protein GI | 195953769 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3376] High-affinity nickel permease |
|---|
| TIGRFAM ID | [TIGR00802] high-affinity nickel-transporter, HoxN/HupN/NixA family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0483986 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAG CAAAATTTAT GCTGTTTGGG CTTTTGGTGT TCAACACTCT GGTATGGAGT
TTATTCGTAA CAAGCTTTTA CAATATACCG GGGCTTTTGG CTATAGGAGG TATGGCGTAT
CTTTTTGGAC TAAGACACGC TTTTGATGCA GATCATATAG CAGCCATAGA CAACACCACA
AGAAAATTGG TTCAGGATGG TAAAAATGCC AACAGCGTAG GTTTTTTCTT CTCGCTTGGG
CATTCAAGCG TTGTTATAGG ATTGTCGGTG GCTCTTATAT TTGCTACAAA GGCCGTAAAA
AACTCCATAC CCACTTTGCA AAACATGGGA AACATAGTAG GTACTCTCAT ATCAGCTTTA
TTTCTAACGC TCATAGGTAT TATCAACATA TTTATATTTA AAGCCCTATA CGATATATAT
AAAATGTATA GAGAATCTTC TTCTGAATAT CAAGAAGAAC TAAACAAGAT ATTTCAAGAG
CTTTTAAACA AAAGAGGTTT TATGGGAAGG TTTTTTAGCT TTTTGTATAA AAAAATAGAT
GCCCCTTACA AAATGTATAT AGTAGGATTT TTGTTTGGTC TTGGTTTTGA TACGGCTACA
GAAATTGCTA TACTTGGTAT ATCTGTGGCT TTGGCAAAAA CAAGTATGGA TATATGGAGC
ATACTGTTGT TTCCTCTGCT TTTCACAGCA GGTATGACGT TAATGGATTC TTTTGATTCT
TTTATCATGA ACAACATATA TGCTTGGACC AACAACGACC CTATAAGAAG ACTATCTTTT
AACCTTGTTA TCACTGGTGC TAGTATTTTT ATAGCCCTTT TTATAGGCAT GCTGGAGTTT
CTACAGATTC TAACGAAGCA GTTTATGCCA AAGGCTTACT TTACAAATTT AGTCAATGCT
ATTCCTCTTG GCAAAGCTGG TATATTTATC GTGCTTTTCA TGATATTCAC ATTTTTAGGA
GCGTTTATTT TCTATGGAAA AGCTATAAAA CAAAATATAT ATCATACAAG AAATATAAAT
TAA
|
|---|
| Protein sequence | MKKAKFMLFG LLVFNTLVWS LFVTSFYNIP GLLAIGGMAY LFGLRHAFDA DHIAAIDNTT
RKLVQDGKNA NSVGFFFSLG HSSVVIGLSV ALIFATKAVK NSIPTLQNMG NIVGTLISAL
FLTLIGIINI FIFKALYDIY KMYRESSSEY QEELNKIFQE LLNKRGFMGR FFSFLYKKID
APYKMYIVGF LFGLGFDTAT EIAILGISVA LAKTSMDIWS ILLFPLLFTA GMTLMDSFDS
FIMNNIYAWT NNDPIRRLSF NLVITGASIF IALFIGMLEF LQILTKQFMP KAYFTNLVNA
IPLGKAGIFI VLFMIFTFLG AFIFYGKAIK QNIYHTRNIN
|
|---|
| |