| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_1308 |
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| Symbol | |
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| ID | 6744127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | - |
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| Start bp | 1215033 |
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| End bp | 1218050 |
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| Gene Length | 3018 bp |
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| Protein Length | 1005 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 642751119 |
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| Product | ribonucleoside-diphosphate reductase, alpha subunit |
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| Protein accession | YP_002121971 |
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| Protein GI | 195953681 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
[TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGTTA TTAAACGTTC AGGCGCAAGA GAAAAGTTAG ACCTTTTAAA GATAAGGACA
GTCTTAGAAA ATGCTTTATC TTTGCTAAAA GAGTGGAAAA CTACAAAAGA TATATCTGCC
CAAGATATAG AAGAATGGAC AATGGAGGAT TTAAACGAAA TAAACATAGA CGAGATCATG
GAAGATATAG AGATAAATAT CTTTGATGGT ATAGAAACCG CCGCCATATT CCAGCATATA
CTTCATTCTC TTCTCACAAG GGCCATAGAT GACCCAATAT ACGACGCTAT GGCAAGAAAT
GTGCTTTTAC AAAGAATATA CAAACAAGCT TTTGGCGGTA TGTATTCACC TAAGAAAGCC
TACAAAGAGC TTTTCATAGA CTATATAGAC AACGCTGTGG AGCTTGGGCT CTTGGATGAA
AAGCTGGCTT CTTATTATGA CCTTGAAATG CTTGCCCTTG AGCTGGTACC TAAAAGAGAC
CAACTTTTAA AGTTTAACGG TCTATATAAT CTCATGGATA GATACCTTAT AAAAGATTTG
GATACCGGAA ATATCTTAGA AGCTCCTCAA TGGTTTTGGA TGAGAGTGGC AATGGGCGTA
GCTTTGGTGG AAAAAACTCC TGAAGATAGA AACCATTGGG CTATAGAGTT TTATCATATG
ATGTCAAGTA TGGAGTTTAT CCCCTCCACT CCAACGCTTT TTAATTCTGG CACAAGGTTT
CCACAGCTTT CTTCTTGTTT TGTGGTTGAT GAGGAAGACG ATCTTTCTAA AATCTTTGAA
ACTGTAAAAC AAGTAGGTAT GTTAAACAAA CACGCCGGAG GAGTTGGGCT ACCAGCTACA
AAACTAAGGG CAAAAGACTC AATAATAAGA AGCATTCAAG GAAAATCCTC AGGTATAATA
CCGTTTTTAA AGATAATAGA TGAGACGATA ACAGCGGTAT CTCAAGGTGG AAGAAGAAGA
GGCTCAGCAC TGGCTTCACT GGAGCCATGG CATCTTGATG TATTTGATTT TGTGAGAACA
AAAAGAAAAT GGGGCGATGA TTCTCAAAGG TTTAAGAACT TAAAAATTGC CCTCTTCTTA
AACGATGAAT TTATGAGAAG GGTCGAAGAA AATGGAGACT GGTATCTTTT TGACCCAGCT
GATTGCCCAA AATTAGTTAG CACCTATGGT AAAAAGTTTT CTAGAGAATA TTCAAAATGT
ATAAGAAAAG CTCTATCGGG AAAGATAAGG CATAAAAAAA TAAAAGCGGT GGAGCTATTT
AAAGAGGCTA TAGAAAATAC CATACAAACT GGAGAGCCTT GGTACACATT TAAAGATCCC
ATCAACATAA GACACCCAAA CAAACATACT GGGACAATCC TTACCACAAA CTTATGTACA
GAGCAACTTT TGGTATCTAC CTATGATTCT ATAGAGTCTT GCAATTTAGG CTCTTTGGTA
TTGCCTAGAG CGTTGCTAAC GCATTTCAGA GTTAATGAAC ATGCACAGCC ACTCAATAGC
TCTGAGAACG GCTCAAAGCA CACTAAGTTT TTATCAAATA ACACTTTTGA CTGGGAAAAG
TTTAAAGCGG TTATAAGAAA AGCGATAAGA TTTTTAGACA ACGTCATAGA TGCCAACTAT
TATGCTTTAG AAGCTGTGGA AAAAGGCACA AAACAAAGCA GGAAAATAGG CCTTGGGTTT
ATGGGATATC AAGATATGAT AGAAAAGCTA AAACTACCAG TAGATTCAAA AGAAGCTTTG
AAGCTTTTAG ATAAAATAGG AGAAACGATG TCTTACGTTG CTATAGAAAC CTCTGTGGAG
CTTGCCAAAG AAAGAGGCAC TTATCCAAAC TTTGATGGTT CGGACTGGTC AAAGGGGATC
CTACCAATAG ATACCCTAGA GCATCTTTTT AGAGAAAGAT CTTTAACCAA CGACAAGTAT
ACCACGCCCT ACAATGACAT GGTTCAAAAC TATGCGGATG AGAATAGAGC GGTGCAATCG
CGTTTCGACG ATAGGGAACA TGCACAGCCA CTCAATAGCT CAGAGAACGG CGCAAGGCAC
ACTATAGATT ATAAGAAGCT TGTTGATAAG TATGTAGGGC TACAAGTATA CCACGATTCT
GATGATATAG CGGAAGATGA AAGCAGAGCG ATATCATCGC ATTTCGACGC TAAAGAACAG
GACAAGTCTA CCACGGTCTC ACAGACACTT CAAAGCTCAG AGAACGGCTT GGAGCACACT
TTGCCAGCAT TTAATTGGGA AGAACTAAGA GAAAAAGTAA AACAAGGTAT AAGAAATGCC
TGTCAGACAA CGCTTGCGCC TACGGCCACA ATTTCTATAA TAGCCGGGAC TTCTCAAAGC
TTTGAGCCTT ATTACGCTTT GGTATATTCA AGGACAAACA TAGCTGGAAG ATTTTTAGAA
GTAAACGAAA ACTTTATACG CGATCTAAAA AAACTAGGTC TTTGGGATAG ACTAAGAGAA
GATGTATTAC TTCAACAAGG TTCTATACAG GACATAAAAG AAATACCTCA AGAGATAAAA
GATATATACA AAACCGCCTA CGAAATAGAT ACCGAAGTCT ATATAAAACA AGCGGCTGTA
CTTCAAAAAT GGATTGATTC TTCCATATCA AGAAACCTTT ACTTTAACAC CAGAGACCCA
CAAAAGATAA TGGAAATATA TCTAAAAGCT TGGAAATACG GACTAAAAGC CACATACTAC
GCCTTTATGC CAGCAAAGAT AAAAACAGAA GGAAAATACG TGCATGAGGA CATAAAAGAG
CCGCAATCAT CACAAGATAA AGAAGAAGAT AAAGCTAGAG CGCTATCAGC GCATTTCAAC
TCTGAGGAAC AGACAAAGGC ACCCAAGAAT TCAGAGACAA GGCACGCTGT TGAAAGCACC
CAAGCTAAAA CTGTTAGCAG TGCATCATCT TCGAAGCCAA AAAATGGTAA CAAAGGCAAA
CTCGTTGAAA GCGATAATCT AATGCCTTTA GACGAGATAA TGAAAGAAAA AGGCTATTGT
GAAGAATGCG GTAACTGA
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| Protein sequence | MEVIKRSGAR EKLDLLKIRT VLENALSLLK EWKTTKDISA QDIEEWTMED LNEINIDEIM
EDIEINIFDG IETAAIFQHI LHSLLTRAID DPIYDAMARN VLLQRIYKQA FGGMYSPKKA
YKELFIDYID NAVELGLLDE KLASYYDLEM LALELVPKRD QLLKFNGLYN LMDRYLIKDL
DTGNILEAPQ WFWMRVAMGV ALVEKTPEDR NHWAIEFYHM MSSMEFIPST PTLFNSGTRF
PQLSSCFVVD EEDDLSKIFE TVKQVGMLNK HAGGVGLPAT KLRAKDSIIR SIQGKSSGII
PFLKIIDETI TAVSQGGRRR GSALASLEPW HLDVFDFVRT KRKWGDDSQR FKNLKIALFL
NDEFMRRVEE NGDWYLFDPA DCPKLVSTYG KKFSREYSKC IRKALSGKIR HKKIKAVELF
KEAIENTIQT GEPWYTFKDP INIRHPNKHT GTILTTNLCT EQLLVSTYDS IESCNLGSLV
LPRALLTHFR VNEHAQPLNS SENGSKHTKF LSNNTFDWEK FKAVIRKAIR FLDNVIDANY
YALEAVEKGT KQSRKIGLGF MGYQDMIEKL KLPVDSKEAL KLLDKIGETM SYVAIETSVE
LAKERGTYPN FDGSDWSKGI LPIDTLEHLF RERSLTNDKY TTPYNDMVQN YADENRAVQS
RFDDREHAQP LNSSENGARH TIDYKKLVDK YVGLQVYHDS DDIAEDESRA ISSHFDAKEQ
DKSTTVSQTL QSSENGLEHT LPAFNWEELR EKVKQGIRNA CQTTLAPTAT ISIIAGTSQS
FEPYYALVYS RTNIAGRFLE VNENFIRDLK KLGLWDRLRE DVLLQQGSIQ DIKEIPQEIK
DIYKTAYEID TEVYIKQAAV LQKWIDSSIS RNLYFNTRDP QKIMEIYLKA WKYGLKATYY
AFMPAKIKTE GKYVHEDIKE PQSSQDKEED KARALSAHFN SEEQTKAPKN SETRHAVEST
QAKTVSSASS SKPKNGNKGK LVESDNLMPL DEIMKEKGYC EECGN
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