| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_1267 |
|---|
| Symbol | |
|---|
| ID | 6744085 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Hydrogenobaculum sp. Y04AAS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011126 |
|---|
| Strand | - |
|---|
| Start bp | 1176495 |
|---|
| End bp | 1177766 |
|---|
| Gene Length | 1272 bp |
|---|
| Protein Length | 423 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 642751077 |
|---|
| Product | Succinate--CoA ligase (ADP-forming) |
|---|
| Protein accession | YP_002121930 |
|---|
| Protein GI | 195953640 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0045] Succinyl-CoA synthetase, beta subunit |
|---|
| TIGRFAM ID | [TIGR01016] succinyl-CoA synthetase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 58 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTCT ATGAGTTTGA AGCTTACGAT AAGATTTTTA AGAAGTACGG CGTACCTGTT
TTAAATTATA TGTATGCCGA TCATATCAAC GATGATTTAA AGGACTTTGC CAATAAACTT
GGTGAGTCTG TGGTTAAGTC TCAAGTGCTT GTAGGGAAAC GTGGCAAGGC AGGGGCTGTA
AAACTTTGCA AAACACCGGA AGAGGCTATA GAAACTGCTA AAGCTCTTTT ACAGTATCCA
GTTTACGGCG AGATGCCAGT GGGTATTATA ATTGCCGAAA AAGCCAAAAT ACTAAAAGAG
TTGTATGCCT CTATCACATA TTCTACAGAG ACAAGGACTC CGGTGTTAGT GCTTAGCTTA
GAAGGTGGTA TGGATATAGA AGAAGTCCCA CCAGAAAAGG TAAGAACCTT TAAGATAGAT
CCATTGGTAG GTTTATATCC TTACATGGTA AGAGAATACC TTATGGATAT GGGATTTCCT
AAGGAGTATA TTGGAGTCTT AAGGGAGTTA TCAGAAGTTA TAGCAAACCT TTATAAGGCT
TTTTGGGAAA CAGAAGCAAA ACTAATAGAG ATAAACCCCC TTGCCATATG CGATGTAAAT
GGAAAGCAAA AGGTGTATGC CCTTGATGCT GTAGTAACTA TAGATGATGA TGCATCTATA
CCACCTACTA AGATATACGG TGTTAGAAGT GCTATGAAAC GCCCACCTAC CCAAAGAGAG
ATAGAAGCCT CTTTGATAGA TAGAGACGAT CATAGAGGCA AAGCCGGTTC TTATGTGGAA
ATGGATGGTG ATATAGCCCT CATGACCTTT GGTGGTGGTG GTTCTACGGT TACCATAGAA
ACTTGCTACA ACATAGGCCT AAAGCCTGCA AACTTTACAG ATATAGGCGG AAATCCACCG
GCTGAGAAGA TGTACAAAAT AACACATATC ATTCTTTCAA AACCAGGTAT AAAAGGTGTT
TTGGTATGCG GTGGTACCTC AAACAACACT CGTATAGATG TGACGCTTGG TGAAGGCGTG
GCAAACGCTA TAAGAGATCT GAAAAAAGAA GGTAAACTTG ATCCAAATTG GGTATGGGTA
GTAAGAAGAA ACGGTCCTGA AGCTGAAAAA GGTTTGAGGA TGCTTTATGA GGCTTTTAAA
GAGTGTGGTG TGAAAGGTGA GATTTACAAT TCGTCTTTAC CTCTTACTGA AGCACCTGTT
AGATTGAAGT ATCTCTTGGA GCATCAAGTA AAATCTATAA ATGATAACGT TGCTGAAGAT
TTAGGAGTAT AA
|
|---|
| Protein sequence | MNLYEFEAYD KIFKKYGVPV LNYMYADHIN DDLKDFANKL GESVVKSQVL VGKRGKAGAV
KLCKTPEEAI ETAKALLQYP VYGEMPVGII IAEKAKILKE LYASITYSTE TRTPVLVLSL
EGGMDIEEVP PEKVRTFKID PLVGLYPYMV REYLMDMGFP KEYIGVLREL SEVIANLYKA
FWETEAKLIE INPLAICDVN GKQKVYALDA VVTIDDDASI PPTKIYGVRS AMKRPPTQRE
IEASLIDRDD HRGKAGSYVE MDGDIALMTF GGGGSTVTIE TCYNIGLKPA NFTDIGGNPP
AEKMYKITHI ILSKPGIKGV LVCGGTSNNT RIDVTLGEGV ANAIRDLKKE GKLDPNWVWV
VRRNGPEAEK GLRMLYEAFK ECGVKGEIYN SSLPLTEAPV RLKYLLEHQV KSINDNVAED
LGV
|
|---|
| |