Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_0950 |
Symbol | |
ID | 6743762 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | - |
Start bp | 892112 |
End bp | 892807 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642750756 |
Product | hypothetical protein |
Protein accession | YP_002121615 |
Protein GI | 195953325 |
COG category | [A] RNA processing and modification |
COG ID | [COG5178] U5 snRNP spliceosome subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000000105879 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAGGT TTCTTGCAAT GCTGGCGCCA GCCATAGGTC TGGGGTTCAT GCTTTATGCA GCAAGCGCGC ACGGAAATGA AGGTGCAGGT GTGTACGCAA ACCCAGAGCC AGACACCTGT AACAATGGCG CTTATTGGAT AACTTGTATT GACATCAACA AGATCAAGGC TCTTGGTAAA GAAGAGCACA AACCAGCTCC ACCTCCACCT CCACCACCAC CTCCACCACC ACCTCCACCA CCACCACCCC CTCCACCAGA AACGCCACCA CCACCTCCAC CTCCAGTAAG TAAGCCAATA GTAAAACCGC ACGCTATGTA CGGTTATTAC AGAGTAAAAC CATGCGATAC TCTTTCTACA ATAGCTCAAA GGATTTACGG TACCCAAGTA TACTGGCCAT CAATCTATGA CCTAAACAGA AGAGCCATTG GTAGAGACCC ATGGATATTG AGAGTAGGTA TGAGGCTAAG ATACTTAGTA CATCTCACAC CAGCCGAAAG AGCAAAAGCA AGACGTGAGT TCAACTACTG GACACTCAAA TACAAAGACA GAAAACGTAA CCCACTCTGT ATACTCCACG GCAAACCAGT AGAAGTAAAA TCTCACGCCA AACACATGGC AAAAACCGCC AAAAAAGCCC ACACAAAAGC TAAAGCTGCA GCTAAGAAAG CTACAGAAAA AGCCAAGAAG AAATAA
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Protein sequence | MNRFLAMLAP AIGLGFMLYA ASAHGNEGAG VYANPEPDTC NNGAYWITCI DINKIKALGK EEHKPAPPPP PPPPPPPPPP PPPPPPETPP PPPPPVSKPI VKPHAMYGYY RVKPCDTLST IAQRIYGTQV YWPSIYDLNR RAIGRDPWIL RVGMRLRYLV HLTPAERAKA RREFNYWTLK YKDRKRNPLC ILHGKPVEVK SHAKHMAKTA KKAHTKAKAA AKKATEKAKK K
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