| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0665 |
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| Symbol | |
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| ID | 6743465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | - |
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| Start bp | 592902 |
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| End bp | 594260 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 642750460 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_002121330 |
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| Protein GI | 195953040 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.020482 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAAAA AAATTATATA TTTAGGAATG GTGGTTGGCG TAGTGGCCCT GTCTAGTTGC
GAAAGAGTTT ATCAAAAGAA AGATTTTCAA GATTATTCAA ACTTTGTAGA ATACTCTGAG
AGCGTTGTTC CTTTTTATCT TGATATGATA CAAAAGCCTA TGTATTTTAA CTTTCATCTT
ACAAACCCTC AAAAACGCAA AGAGTACGAA CATTTGGCTT CTTTATACTG TAAGGCAAAA
GGTGGTGATT TTATAAAGAA CGGTCCATGG CTATATTGCA ACTCTTCAAA AGACGAATAC
ATGATACATG AGACAGATTA CGGATTTGAG GTTTATGCAA AACCCACCAA GCAGATTGAA
GAGATTATAA GTAAAGGCAT AAACTTAATG AAGTCAGAAA GATATCAAAA AGCAAATGAA
GTGTTAAAAA AAGCTTTTGA GTTTGCAAAC GTAGTAGGTA AAAAGTATCT TATTGGAGAA
GCAGCTTATT ATATAGCTTA CAACGACTTT TTATCATCTA GATACTACGA CATAGACAAG
GTATTTAAAT ATATAAGGAT AGCTCAAGAA AATGGTATTG ATGTATCTAG TTTTATAAGT
GATATCAAAA TATATACTCA GAAGATTCTT AATAGCGTGT TAAACAAGGC CAAGTCTGGT
CAAAAACAAC TCGCTTTAAG AGATTTGTCT AGAGCTTTTA AAATAGCAAA ACTTCTAAAC
GACAACAACC TTTTATATAC GACATATTAT TATTCTGGCA ATTTCTACCT TGAAACTGGA
GATTACGACA AGGCTATAGA ATATTTACAA CAAGCCATAG CTCTTGGTCA GGATAAGCCA
AATACGCTTG GGCTTTTATA CAACCTTTTA GGGCAAGCCT ATGAAAAGAA AGGTGATTTG
CCAGATGCTG AAAAGTATTA CGTAGAATCT TCTCAGATAG CTCTTAAAAA CGGTGATACG
GAAGGAGCCG CTATACCACT AAGGCATCTT GGCGATATAT ATTATCAAAA AGGCAATTAC
CAAAAAGCTT ATCAGTATCA CTTGCAAGCC CTTATGATAA GAGGGTATAA AACCAGAAAG
GGTGGTGCCA GATATGGACT TGATTTGGAC CTATACAACG TAGGCAACGA CTTGTATAAA
ATGAATCAAT GCAAAAATGC AGTGGCATAT CTTGATGAAG CCGTACCTTA TTTAGAAAAG
TTTGGTATAT ACGATACGAT GGCAAAAGCC CTTTATGAAG ATATATCTTG TTATCAAAAG
CTTGGAAACA ATGAAAAAGC GAAAGAGCTT TTCAACCAAT ACAAAAGTAT CTTAGCCCAA
CAGAATATGC TGCCAAAATT TAAGAGTCTT GGATTTTAA
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| Protein sequence | MDKKIIYLGM VVGVVALSSC ERVYQKKDFQ DYSNFVEYSE SVVPFYLDMI QKPMYFNFHL
TNPQKRKEYE HLASLYCKAK GGDFIKNGPW LYCNSSKDEY MIHETDYGFE VYAKPTKQIE
EIISKGINLM KSERYQKANE VLKKAFEFAN VVGKKYLIGE AAYYIAYNDF LSSRYYDIDK
VFKYIRIAQE NGIDVSSFIS DIKIYTQKIL NSVLNKAKSG QKQLALRDLS RAFKIAKLLN
DNNLLYTTYY YSGNFYLETG DYDKAIEYLQ QAIALGQDKP NTLGLLYNLL GQAYEKKGDL
PDAEKYYVES SQIALKNGDT EGAAIPLRHL GDIYYQKGNY QKAYQYHLQA LMIRGYKTRK
GGARYGLDLD LYNVGNDLYK MNQCKNAVAY LDEAVPYLEK FGIYDTMAKA LYEDISCYQK
LGNNEKAKEL FNQYKSILAQ QNMLPKFKSL GF
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