| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0614 |
|---|
| Symbol | |
|---|
| ID | 6743411 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Hydrogenobaculum sp. Y04AAS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011126 |
|---|
| Strand | - |
|---|
| Start bp | 548844 |
|---|
| End bp | 550235 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 642750406 |
|---|
| Product | signal recognition particle-docking protein FtsY |
|---|
| Protein accession | YP_002121279 |
|---|
| Protein GI | 195952989 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0552] Signal recognition particle GTPase |
|---|
| TIGRFAM ID | [TIGR00064] signal recognition particle-docking protein FtsY |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.242087 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTTTTT GGAAAAAGTC GGATACTGAG AAAAAGGCAG AGGAAGGGTC TAAAGAAGCT
ATATTAGAGC TTATAAAAAG CGGTAAAACC TCTAAAGCAG AATCTATATT AGAAAACTTT
AAAGACAACG AAGAACTAAG AAAAATACTA TTTGATTTAT ACTTAAAAAA TAACGAATAT
TACAAAGCAT ATACGCTTAT AGAAAAGTAT AAAGATGTGG GTACAGCTCC AGAAAGGGCT
TTGGTATACG AAGAATCTGG ATATATCACA AAAGCTATAG AGGAATATTT AAAGATAGGA
GATTTTAACA GTCTTTATAA AATAGGGCTT TTATATAAGC ACATAGGAGA TTACCAGAAG
GCTTTAGAAT TTATCAATAG AGCTTATCAG ATAGTTCCTT ACGATAAGAA AAAAGAAGTA
GAAGAGCTTT TGTTTGACCT CAAAAAGATA TTAGGAATAG TGGATATACC AAAAGAAAGC
CTCTTTGAAA AAATAAGTAA GACCCTCAAA AAAACAAAAG ATACTATCTT GCTAAATACT
ATTTTTATAA ATAGAAAAAT AGATGAAGAG CTTTTTGAGG AATTAGAGGA GAAGTTAATA
AGAGCGGATA TAAACGTTAA GCTTGTTTTA AATATTGTAG AAAATCTCAA AAAAGAAGCT
ATAAAACGCA ATTTACAGAC AGCAGAACAG CTTAAACCAC TTTTGAAAGA AGAGCTTTTA
AGCATTATAA GAAACTGCGG TAACAAAGAT TTATTTTTCG AGCTTTTAAA TGAAAAAGAA
AAACCGTTTG TTATATTGTT CTTAGGGGTT AATGGGTCTG GTAAAACCAC TACGATAGGA
AAACTGGCTA GCATATACAA GGCTCAAAAT AAGAAAGTGC TTCTTGGAGC AGCGGATACC
TTTAGAGCAG CTGCAATAGA GCAATTAGAA GTATGGGCCC AGAGGGCTCA AGTGGATATA
GTTAAAAAAC AAGAAGGTGC TGATCCTGCA TCGGTGGCTT TTGAAGCCAC TAAAAAAGGT
TTGGAAGAAG ACTACGATGT GGTAATTATA GACACGGCAG GAAGGCTACA TACGAAAGAA
CCACTTATAA ATGAGCTTAG AAAAATTAAA AAGTCTATTC AAAAAGCTTA TGAAAAAGCT
CCTCAGAAAG CTTTGCTAGT TATAGATTCT ACTATAGGCC AAAACTCTAT ATCTCAAGCA
AAGATATTTA AAGAGGCTGT AGATATAAAC GGTTTGGTGA TAACGAAATT AGACGGTACA
TCCAAAGGTG GAAGCGTTAT CTCTATATGT AAGGATTTAG CACTACCAAT ATATATGACA
GCAGATGGTG AAAGAATGGA AGATTTGGAC CCTTTTGATC CGGAAACGTT TGTAGACGCT
CTACTTAGTT AG
|
|---|
| Protein sequence | MFFWKKSDTE KKAEEGSKEA ILELIKSGKT SKAESILENF KDNEELRKIL FDLYLKNNEY
YKAYTLIEKY KDVGTAPERA LVYEESGYIT KAIEEYLKIG DFNSLYKIGL LYKHIGDYQK
ALEFINRAYQ IVPYDKKKEV EELLFDLKKI LGIVDIPKES LFEKISKTLK KTKDTILLNT
IFINRKIDEE LFEELEEKLI RADINVKLVL NIVENLKKEA IKRNLQTAEQ LKPLLKEELL
SIIRNCGNKD LFFELLNEKE KPFVILFLGV NGSGKTTTIG KLASIYKAQN KKVLLGAADT
FRAAAIEQLE VWAQRAQVDI VKKQEGADPA SVAFEATKKG LEEDYDVVII DTAGRLHTKE
PLINELRKIK KSIQKAYEKA PQKALLVIDS TIGQNSISQA KIFKEAVDIN GLVITKLDGT
SKGGSVISIC KDLALPIYMT ADGERMEDLD PFDPETFVDA LLS
|
|---|
| |