| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0604 |
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| Symbol | |
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| ID | 6743400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | - |
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| Start bp | 538513 |
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| End bp | 539391 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642750395 |
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| Product | integrase family protein |
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| Protein accession | YP_002121269 |
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| Protein GI | 195952979 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTATAA TAGATGCTTG GATAAAACAT TTAGAGAGGA CAAGGAGTGC TTTTACAAGA
AATTCTTATA TAAATCATAT AAAAACGTTT TCGCATGTTG TTTCTAAAAA CTTAGAAACT
GAAGAAGATT TATCAAATAT AGCATCAAAG AATGTATATC AATTTGTGGA CTATGCGTCT
TTGTCTCCAC AAACAATGTT GGCTATTTTT AGTGCTTTGA AGCACTATAT CAAATTTGCT
TATAGAAGAA ATATTTTATC TGAGGAAAAT TACAACGATA TATTAAAAGC CATAGAAGAA
GTTAGAGAAG ATTTAAATAT GAAAAAACAA AAATATCCAC CTAAAGCTCT ATCCGAGGAC
GAGCTAGAAA AAATATTTAA AGCTGTAAAA GACACTAGAT ACTATAAGAT CTACAACCTT
TTTCTCAACA GCGGTATAAG GCTTATAGAA TTTGAAAAAT TAAGACCAGA TAACTTTTTT
TTAGATAAAT CAAATATTCT TTGGATAAGA CTGGACGCTA ACATGACGAA AAGGAACAAA
CCACGCATAA CTCCCGTTAT AAGCTTTAGC AAGGATAAGA CGATAGAGAT CGGGCTCCAA
ATATACGAGT GGATAGAAAA CTTTGAATAT AATTTTAGGG TTAAAAGAGG GGTTTTGCAA
GTGTATACAG ATAGATTATC CAAAAGACTA AATATAGATT TTAGTATCCA TAGTTTTCGG
CATACTTATA TTACAAACTT GGTAAACTAT GGATTTTCAG CAGAAATTGT AAAAGAGTTT
GTTGGGCATT CTGATATTAA AACCACAATA GATACATATT ATAAATTTTC ACAAAAAAGG
GCTCAAGAAC TTGTAAATAA GCTTTTTGGC AACAATTAA
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| Protein sequence | MSIIDAWIKH LERTRSAFTR NSYINHIKTF SHVVSKNLET EEDLSNIASK NVYQFVDYAS
LSPQTMLAIF SALKHYIKFA YRRNILSEEN YNDILKAIEE VREDLNMKKQ KYPPKALSED
ELEKIFKAVK DTRYYKIYNL FLNSGIRLIE FEKLRPDNFF LDKSNILWIR LDANMTKRNK
PRITPVISFS KDKTIEIGLQ IYEWIENFEY NFRVKRGVLQ VYTDRLSKRL NIDFSIHSFR
HTYITNLVNY GFSAEIVKEF VGHSDIKTTI DTYYKFSQKR AQELVNKLFG NN
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