Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_0453 |
Symbol | |
ID | 6743247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | + |
Start bp | 394008 |
End bp | 394418 |
Gene Length | 411 bp |
Protein Length | 136 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 642750246 |
Product | PilT protein domain protein |
Protein accession | YP_002121121 |
Protein GI | 195952831 |
COG category | [R] General function prediction only |
COG ID | [COG2402] Predicted nucleic acid-binding protein, contains PIN domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000000117924 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTTTTAT TAGACACAAA CATAATATTG GAAATAGCAT TGGAACAAGA AAAAGCTCAA GAATGTGTAA ATTTGTTAGA ACAGTACGAT AAAATTGATT TTTTTATATC TGATTTCTCG ATTCATTCAA TAGGTGTAAT ACTTAAGAAA CGAAACAAGC TTGAAAAATT TGATAAATTG ATAGAAGACC TTAGACTTGT TCTAAAAGCT ATATTGTCGC TAGACCATTA TTATGACTTA AAACGATTGA TAAATATAAT GAAAGTGTTT GATCTTGATT TTGATGATGC TTATCAATAT AGAATAGCAG AAAAATACAA ACTAACCATT GTTAGTTTTG ATAAAGATTT TGATAAAACA AAATTAGGCA GGAGAACAAC AACAGAGATT TTACAAACAA TCAATCATTG A
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Protein sequence | MLLLDTNIIL EIALEQEKAQ ECVNLLEQYD KIDFFISDFS IHSIGVILKK RNKLEKFDKL IEDLRLVLKA ILSLDHYYDL KRLINIMKVF DLDFDDAYQY RIAEKYKLTI VSFDKDFDKT KLGRRTTTEI LQTINH
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