Gene HY04AAS1_0272 details

Gene Information

• Locus tag: HY04AAS1_0272
• Symbol: rplP
• ID: 6743066
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Hydrogenobaculum sp. Y04AAS1
• Kingdom: Bacteria
• Replicon accession: NC_011126
• Strand: +
• Start bp: 244895
• End bp: 245320
• Gene Length: 426 bp
• Protein Length: 141 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 642750065
• Product: 50S ribosomal protein L16
• Protein accession: YP_002120940
• Protein GI: 195952650
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0197] Ribosomal protein L16/L10E
• TIGRFAM ID: [TIGR01164] ribosomal protein L16, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.000000000575408
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTTTTT TACAACCTAG TAGACAAAAA TATAGAAAAA CCCAGAGAGG TACTTTAAAA 
GGTAAATCTT TTAGAGGAAA TCAGGTGGCT TTTGGAGAAT ACGGTATTCA AGCGTTGGAA 
AGCCATTGGA TTACTCAGAG ACAGATAGAA GCTTCTCGTA TAGCTTTGGT GAGAAGTCTA 
AGAAAGGGTA CAAAGGTATG GATTAGAATT TTTCCCGATA AGCCATATAC CAAGAAACCT 
GCAGAGGTTA GAGGTGGTGG TGGTAAAGGT GATCCAGAAG GCTATGTAGC CGTTGTAAAA 
CCTGGTAGAA TAATGTTTGA ATTCTCAGAT GTACCTCAAG ATATGGCCGA AGAAGCTTTT 
AGAAAAGTAT CCGCTAAGCT GCCTATAAAG GTAAGACTTG TTAAGGCAGG AGGCATGAGC 
ATATGA 

 

Protein sequence

MSFLQPSRQK YRKTQRGTLK GKSFRGNQVA FGEYGIQALE SHWITQRQIE ASRIALVRSL 
RKGTKVWIRI FPDKPYTKKP AEVRGGGGKG DPEGYVAVVK PGRIMFEFSD VPQDMAEEAF 
RKVSAKLPIK VRLVKAGGMS I