| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0180 |
|---|
| Symbol | |
|---|
| ID | 6742969 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Hydrogenobaculum sp. Y04AAS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011126 |
|---|
| Strand | - |
|---|
| Start bp | 161474 |
|---|
| End bp | 162457 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 642749970 |
|---|
| Product | protein of unknown function DUF140 |
|---|
| Protein accession | YP_002120850 |
|---|
| Protein GI | 195952560 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
|---|
| TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACTTAA CGAAAGAAAC CATTGAGGGG AAAATTGATG TATCTATCTT TATAAAAGAG
CACACAATAG ATATAAAAGA TATTGAGAAA TTAGATACCT TCGGAGCCAT TTTTGTATTG
GAGCTTTTAG AAAAATATAA AGATAAAGAA CTAGTAGGCA AAAAAGAACA TATAGAGTTT
ATACAAAAAG TAAAAGAGCT ATTAAAATAC AACAACGAAA AGACAAAAAA AGACTCAAAT
ATAAACTTAT CTTTAACGTT TTTAGAGTAT ATAGGAATAT TGGTTTACCA TAGTTTTAAA
AATATAAAAG ATATAGAATT TGAATCTTTT TTAAAAGAAG TAGAAAGTTC TGGTATTGGC
TCTCTTTTTA TATTGGCGGT GCTTTCGTTT TTGGTAGGGA TAGTGATAGC TTATCAAAGC
GCAAATGAGC TTATAAGCTT TGGAGCAAAT ATATTTATAG TAAATCTAAT AGGTATATCG
GCCTTTAGAG AGCTTGGTCC ACTTATCACC GGTATAATAT TGGCTGGTAG GGTAAGCAGT
GGATATACAG CGAACATAGG CATAAGAAAT GTATACGAAG AAATCGATGC TATAGAGGTG
ATGAGCATAT CTCCTTACGT GGTGTTTGGT TTACCAAGAA TCATAACTCT TACATTGATA
ACGCCTTTGC TGGTGCTTTT TTCCAGCAAC GTAATGGTAC TAGGCGGGGC TATAATAGCA
AATACTTCTT TAGATATCCC TTTTGATATG TTTTTTGATA GACTAAGAGA GGTTGTAGGA
TTTAACCAGG TGTTTGTGGG TTTGGTAAAA GCTCCGTTTT TTGGAGCATA TATAGGACTT
GTAGGCACAT ACTTTGGTTT TTATTCTGGT AAAAAGCCTG AAGACGTCAC ATTAAACGTT
ATGAAAAGTG TAGTGATAAG CATCTCTGGT ATCATAGTAA TAGATGCTTT ATTCTCTATC
ATCTTTGCAA AGATTGGCAT ATGA
|
|---|
| Protein sequence | MDLTKETIEG KIDVSIFIKE HTIDIKDIEK LDTFGAIFVL ELLEKYKDKE LVGKKEHIEF
IQKVKELLKY NNEKTKKDSN INLSLTFLEY IGILVYHSFK NIKDIEFESF LKEVESSGIG
SLFILAVLSF LVGIVIAYQS ANELISFGAN IFIVNLIGIS AFRELGPLIT GIILAGRVSS
GYTANIGIRN VYEEIDAIEV MSISPYVVFG LPRIITLTLI TPLLVLFSSN VMVLGGAIIA
NTSLDIPFDM FFDRLREVVG FNQVFVGLVK APFFGAYIGL VGTYFGFYSG KKPEDVTLNV
MKSVVISISG IIVIDALFSI IFAKIGI
|
|---|
| |