Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_0137 |
Symbol | |
ID | 6742923 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | - |
Start bp | 122695 |
End bp | 123561 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 642749924 |
Product | D-alanine/D-alanine ligase |
Protein accession | YP_002120807 |
Protein GI | 195952517 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000000588497 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCATAA CGGTTATAAC TGGTGGAGAT TCACTTGAGA AAGAGATTGC CCTAAAAGGT GCTAAAGCGG TAGAAGAGTC CCTTAAAAGG CTTGGCTACG ACGTAGATGT TTTAGAAATA GACAAAGATT TATGTTTTAA ACTAAAACAG ACAAATCCAG AAAAAGTTTT TATAATAGCC CATGGGACTT ACGGAGAAGA CGGCAGAGTT CAAGGACTTC TTGATATATT AGGTATACCT TACATAGGTT CAAATACGAA AACAAGTGCC ATATGTATGG ATAAAGATTT TTCAAAACAG ATATTTGAAC AAAACCATAT CAAAACCCCA AAATGGAAAG CTTACAAACC AAAAGATGTT ATAGATTGGA GCATTTTTCC TTGTATTGCA AAACCAGCTT CTGCTGGTTC TAGTTTTGGG CTTTTCAAAG TAGAAGATGA CAAATCTCTT AAAGAAGCCG CTCAAAATAT ATTTAAAATA GACGATAAGC TTATTGTAGA GGAGTTTATA GAGGGTAAAG ATATGACGGT GGGATACTTC AAAGGGTTTA TTTTAGAACC TATAGAGATA ATACCAAAAA AAGGTATATA CGATTTTGAA AGCAAATATA CAAAAGGTAT GTCAGAATAT ATATTTGTGG AAGATGAGAG TATCGCTAAA AAGCTAAAAG AGATAGCTTC AAAGCTAGTG GATATATTTG AATTAAAAGA TATGGCAAGG ATAGATTTTA GAGTAAAAGG TAAAGACGTA TACACCCTTG AAATAAATAC TATACCTGGT CTTACAGAAC TTAGTCTTTT GCCTATGGCC CTTAAAAAAG CAGGCATATC TTTTAACAAG ATGGTGGAGA TGCTTGTAAA TGGCTAA
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Protein sequence | MRITVITGGD SLEKEIALKG AKAVEESLKR LGYDVDVLEI DKDLCFKLKQ TNPEKVFIIA HGTYGEDGRV QGLLDILGIP YIGSNTKTSA ICMDKDFSKQ IFEQNHIKTP KWKAYKPKDV IDWSIFPCIA KPASAGSSFG LFKVEDDKSL KEAAQNIFKI DDKLIVEEFI EGKDMTVGYF KGFILEPIEI IPKKGIYDFE SKYTKGMSEY IFVEDESIAK KLKEIASKLV DIFELKDMAR IDFRVKGKDV YTLEINTIPG LTELSLLPMA LKKAGISFNK MVEMLVNG
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