Gene HY04AAS1_0137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHY04AAS1_0137 
Symbol 
ID6742923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHydrogenobaculum sp. Y04AAS1 
KingdomBacteria 
Replicon accessionNC_011126 
Strand
Start bp122695 
End bp123561 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content34% 
IMG OID642749924 
ProductD-alanine/D-alanine ligase 
Protein accessionYP_002120807 
Protein GI195952517 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes 
TIGRFAM ID[TIGR01205] D-alanine--D-alanine ligase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000588497 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCATAA CGGTTATAAC TGGTGGAGAT TCACTTGAGA AAGAGATTGC CCTAAAAGGT 
GCTAAAGCGG TAGAAGAGTC CCTTAAAAGG CTTGGCTACG ACGTAGATGT TTTAGAAATA
GACAAAGATT TATGTTTTAA ACTAAAACAG ACAAATCCAG AAAAAGTTTT TATAATAGCC
CATGGGACTT ACGGAGAAGA CGGCAGAGTT CAAGGACTTC TTGATATATT AGGTATACCT
TACATAGGTT CAAATACGAA AACAAGTGCC ATATGTATGG ATAAAGATTT TTCAAAACAG
ATATTTGAAC AAAACCATAT CAAAACCCCA AAATGGAAAG CTTACAAACC AAAAGATGTT
ATAGATTGGA GCATTTTTCC TTGTATTGCA AAACCAGCTT CTGCTGGTTC TAGTTTTGGG
CTTTTCAAAG TAGAAGATGA CAAATCTCTT AAAGAAGCCG CTCAAAATAT ATTTAAAATA
GACGATAAGC TTATTGTAGA GGAGTTTATA GAGGGTAAAG ATATGACGGT GGGATACTTC
AAAGGGTTTA TTTTAGAACC TATAGAGATA ATACCAAAAA AAGGTATATA CGATTTTGAA
AGCAAATATA CAAAAGGTAT GTCAGAATAT ATATTTGTGG AAGATGAGAG TATCGCTAAA
AAGCTAAAAG AGATAGCTTC AAAGCTAGTG GATATATTTG AATTAAAAGA TATGGCAAGG
ATAGATTTTA GAGTAAAAGG TAAAGACGTA TACACCCTTG AAATAAATAC TATACCTGGT
CTTACAGAAC TTAGTCTTTT GCCTATGGCC CTTAAAAAAG CAGGCATATC TTTTAACAAG
ATGGTGGAGA TGCTTGTAAA TGGCTAA
 
Protein sequence
MRITVITGGD SLEKEIALKG AKAVEESLKR LGYDVDVLEI DKDLCFKLKQ TNPEKVFIIA 
HGTYGEDGRV QGLLDILGIP YIGSNTKTSA ICMDKDFSKQ IFEQNHIKTP KWKAYKPKDV
IDWSIFPCIA KPASAGSSFG LFKVEDDKSL KEAAQNIFKI DDKLIVEEFI EGKDMTVGYF
KGFILEPIEI IPKKGIYDFE SKYTKGMSEY IFVEDESIAK KLKEIASKLV DIFELKDMAR
IDFRVKGKDV YTLEINTIPG LTELSLLPMA LKKAGISFNK MVEMLVNG