Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_0102 |
Symbol | |
ID | 6742885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | + |
Start bp | 95641 |
End bp | 96027 |
Gene Length | 387 bp |
Protein Length | 128 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 642749886 |
Product | Sterol-binding domain protein |
Protein accession | YP_002120772 |
Protein GI | 195952482 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3255] Putative sterol carrier protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0000978863 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATAAAT TTTTATCTTA TGATTTTATA AAAGCTTACA AAGATCAATG GAACAAAAAC GAGAAACTTA AAAATGATCT TAAAAACTTC TCTGCTAAGC TAAAATATTA TATAATCTCT AAAGAGAATG AAGCGGTAGA GCTTATAATA AAAAATGGAG AGGCTATAAG CTGTGGAATG GCAGACGGTA AAGATTACGA TTTTGAAATG TGGGCTACAT TGGAAGACTG GAAATCGCTT GCTACAGGGC AAATGGGACC AAAAGCTGCC ATGCTTACAA AGAAGTTAAA GTTTAAGGGT TCTATGATAA CAGCTATGAA ATATATGGGA GCTTTTGAGG AGAGCTTGAG GATGATGGGT AGCGTACCTG TGGATTGGAA TGCTTGA
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Protein sequence | MYKFLSYDFI KAYKDQWNKN EKLKNDLKNF SAKLKYYIIS KENEAVELII KNGEAISCGM ADGKDYDFEM WATLEDWKSL ATGQMGPKAA MLTKKLKFKG SMITAMKYMG AFEESLRMMG SVPVDWNA
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