| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_1683 |
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| Symbol | mnmA |
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| ID | 4241210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | - |
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| Start bp | 1910523 |
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| End bp | 1911674 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 638105269 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_719888 |
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| Protein GI | 113461819 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.438884 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATCCA TTGTTTATGA AAAAAAACTA CCAAAACTTA CCTCACTTGA AATTGCTAAA
AATAGTAAAA AGAAAGTGAT TTGCGGTATG TCCGGTGGTG TTGATTCCTC TGTGTCCGCT
TTTATTCTTC AACAGCAAGG TTATCAAGTT GAAGGATTGT TTATGAAGAA TTGGGAAGAA
GATGATGATA CGGATTATTG TACTGCCGCT AACGATTTAG CGGATGCACA GGCTGTGTGT
GATAAATTAG GAATAAAGCT ACATAAAATT AATTTTGCTG CTGAGTATTG GGATAATGTA
TTTGAGCATT TTTTAGCTGA ATATAAAGCC GGAAGAACAC CAAATCCTGA TATTTTATGC
AATAAAGAAA TTAAATTTAA GGCTTTCTTG GAATATGCGG TAGAAGATTT AGGTGCTGAT
TACATTGCAA CAGGACATTA TGTTCGTCGA TCCGATGTAA ATGGACAAAC AAAATTATTA
CGTGGTCTGG ATAGTAATAA AGATCAAAGT TATTTCCTTT ATACCTTGAG CAAAGATCAA
GTGGCTCAAA GTCTATTTCC CGTAGGTGAA ATTGAAAAAC CGATTGTTAG GGCTATAGCA
GAAGATCTCG GTTTGATTAC GGCAAAAAAG AAAGATTCTA CGGGGATTTG TTTTATTGGA
GAACGTAAAT TTAAAGAATT TTTGGCAAGA TTTTTACCTG CACAACCGGG TGAAATTCGT
ATGGTTGACG GTAAAGTCAT CGGCAAACAT GATGGCTTAA TGTATTACAC CTTAGGTCAA
CGTAAAGGAT TAGGTATTGG TGGAGTAAAA GGTTTAAGTG AAGATCCGTT TTATGTGGTA
GAAAAAGATT TAATTAACAA CGTATTAGTA GTTGCACAAG GAAATGATAA TTCCGCCCTA
TTATCACAAG GTTTAATTGC TACTCAGCTA TATTGGGTTG ATCGCCTGCC AATTCGTCAA
AATTTACGTT GTACGGTCAA AACTCGCTAT CGTCAACAAG ATATAGCTTG TGAGGTTATT
CCTCTCAATG ATGATTGTGT TGAAGTGCGG TTTGATGAGC CACAAATTGC TGTTACGCCG
GGACAATCAG CAGTTTTTTA TCAAGGCGAG GAGTGTCTTG GTGGTGGTGT GATTGAAAGA
CAAATTAAAT AA
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| Protein sequence | MKSIVYEKKL PKLTSLEIAK NSKKKVICGM SGGVDSSVSA FILQQQGYQV EGLFMKNWEE
DDDTDYCTAA NDLADAQAVC DKLGIKLHKI NFAAEYWDNV FEHFLAEYKA GRTPNPDILC
NKEIKFKAFL EYAVEDLGAD YIATGHYVRR SDVNGQTKLL RGLDSNKDQS YFLYTLSKDQ
VAQSLFPVGE IEKPIVRAIA EDLGLITAKK KDSTGICFIG ERKFKEFLAR FLPAQPGEIR
MVDGKVIGKH DGLMYYTLGQ RKGLGIGGVK GLSEDPFYVV EKDLINNVLV VAQGNDNSAL
LSQGLIATQL YWVDRLPIRQ NLRCTVKTRY RQQDIACEVI PLNDDCVEVR FDEPQIAVTP
GQSAVFYQGE ECLGGGVIER QIK
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