| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_1556 |
|---|
| Symbol | |
|---|
| ID | 4241077 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haemophilus somnus 129PT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008309 |
|---|
| Strand | - |
|---|
| Start bp | 1752986 |
|---|
| End bp | 1753489 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 638105136 |
|---|
| Product | rare lipoprotein B |
|---|
| Protein accession | YP_719761 |
|---|
| Protein GI | 113461692 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2980] Rare lipoprotein B |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.22375 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAAAA AAATTAAAAT AGCATTACTG GGCGTTGGCA TTTTGCTTAT TAGTGCTTGT
GGGTTTCATT TTCAAAATGG TGAATTAATT CCAAATGAAT TAAGAACATT GGTACTGGAA
AGCAACGACC CTCACAGTAA TATGTCAATT GTACTACGTC GTCAATTACA AGCTAACAAT
GTGAGTATCG TTGATAATCA AAATAATGTC ACTGTTTTGC GTCTAAATAG CACAAAAAAT
ACTGAGCAGG TAGCCTCAGT TTTCAAGCGA GGTTATGAAG CAGAGAAAAT TTTAACCTTA
GAAGTATGGG CAACAGTGAG TTTACCGAAT AAACAAAGCT ATCCGATTTT TGCTAATGTC
AACCGCACTT TCTTTGATAA CTCTCGTGCC GCATTAGCAA AATCAGCAGA GAAGGAGATT
ATTTGGAATG ATATGCGTGA ACAGGCAGCC CGCCAATTAA TTGGCAAAAT GATTGCATTA
CAAACGCAAC TTCAAGGTAA ATAA
|
|---|
| Protein sequence | MFKKIKIALL GVGILLISAC GFHFQNGELI PNELRTLVLE SNDPHSNMSI VLRRQLQANN
VSIVDNQNNV TVLRLNSTKN TEQVASVFKR GYEAEKILTL EVWATVSLPN KQSYPIFANV
NRTFFDNSRA ALAKSAEKEI IWNDMREQAA RQLIGKMIAL QTQLQGK
|
|---|
| |