Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_1519 |
Symbol | udp |
ID | 4241039 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 1714824 |
End bp | 1715582 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638105100 |
Product | uridine phosphorylase |
Protein accession | YP_719729 |
Protein GI | 113461660 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG2820] Uridine phosphorylase |
TIGRFAM ID | [TIGR01718] uridine phosphorylase |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCTGATG TCTTTCATCT TGGCTTAACA AAAGCCTCAC TGGATGGAGC AGAGTTAGCC ATCGTACCAG GTGCACCTGA AAGGGTAGAA CGTATTGCTC GTCTATTGGA TAATCCGAAA TTTTTAGCTT CAACTCGAGA ATTTACTTCT TGGTTGGGTT ATATAGGTCA AAAAGCCGTC GTTGTTTGCT CAACTGGAAT TGGTGGTCCT TCCGTTTCTA TTGCGGTAGA AGAATTAGCA CAACTGGGAA TCCGAACTTT CCTCAGAATC GGTACAACGG GTGCAATTCA ACCGCACATC AACGTAGGAG ATATCCTTAT TACCACAGGA GCAGTACGTC TTGATGGTGC AAGCCGTCAT TTTGCTCCAC TAGAATATCC TGCTGTTGCC CATTTTGATT GCATGTCCGC TTTACATCGT GCTGTTTCAA ATGAACCTAG AGATAGTGTT CATATCGGCA TTACCGCCTC ATCAGACACC TTCTATCCAG GACAAGAACG TTACGATACC TATAGCGGAA AAGTTTGTCG CCATTATCAA GGTTCATTAA AACAATGGCA AGCATTGAAT GTCATGAACT ATGAAATGGA AAGTGCAACA TTATTTACAA TGTGTTCAGC TTTGGGACTG CGTGCAGGTA TGGTATCAGG TGTAATCGTA AACCGTACTC AACAAGAAAT TCCAAACGAA CAAACCATTC ATCAAACTGA ACAAAAAGCT ATTGAAATTG CTATAAAAGC AGCTACTTTA CTACTCTAA
|
Protein sequence | MSDVFHLGLT KASLDGAELA IVPGAPERVE RIARLLDNPK FLASTREFTS WLGYIGQKAV VVCSTGIGGP SVSIAVEELA QLGIRTFLRI GTTGAIQPHI NVGDILITTG AVRLDGASRH FAPLEYPAVA HFDCMSALHR AVSNEPRDSV HIGITASSDT FYPGQERYDT YSGKVCRHYQ GSLKQWQALN VMNYEMESAT LFTMCSALGL RAGMVSGVIV NRTQQEIPNE QTIHQTEQKA IEIAIKAATL LL
|
| |