Gene HS_1348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1348 
Symbol 
ID4240863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1541021 
End bp1542727 
Gene Length1707 bp 
Protein Length568 aa 
Translation table11 
GC content40% 
IMG OID638104925 
Producthypothetical protein 
Protein accessionYP_719560 
Protein GI113461491 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACTA AAAACAAAAA ATTATCAGAT GCCGTGGCAC GGAATTTAAA TGTTACACCA 
ATGGTGAATA CTTCGCCTTC TTATGTGGGA GCGACTGCGA CACATTACCC TACAACTTCT
CAATACATTA CGGTAACGTT GGATAAATTA CGTCCTTATG AGCATAATCC ACGCAAAACC
CGTAATCCTA ACTTTGAGAT GATTAAAGAA TCTATTCGAC GTCGTGGATT AGATCATCAG
CCCAATATTA CCCAACGCCC GGGCGAGCCG TTTTATATTA TTGCAGACGG AGGGAATACG
AGGATTCAAG CTTTAAAAGA GTTATTCAGC GAAACCCAAG ATCAGCGTTT TTGGGCGATT
GAATGCTTGT ATAAACCTTG GAAAGGTGAG ACGGCAGATA GTGTGGAAGC GGAACTTGAT
TTGCTGATCG GTCATTTAAT TGAGAATGAC ACCCGTGCAG ATTTAACCTT TATTGAGAAA
GCATTGGGGA TTCAGCAGGC GAAGGAGTAT TACGAGAAAA AACTTGGGCA TTCATTATCC
GCTCGAGAAC TTTCAAGTGA ATTGGAAAAA GATGGGTACA TTATTCACCA GACAACGCTT
TCTAAGATGG AGCGTTGTGT GGCATATTTG TATCCATATA TTCCTGATGT TTTGTTTAAT
GGATTAGGAA ATAGCCCGAT TGATAAACTC TTAGCCATTC GTAATAACGC ACTTGAAGTT
TGGCAACAAT ATCAATTTGA GACTGACATT ACCTTTGAAG CTATTTGGCA AAATAGTCTT
TCTCGTTGTA ATGATGATAA TCCCTTTAAT GTGAAAACCT TTCAGGATGC GTTAATTAAT
GAGATGACAG ATGCTTTTGA GGGTAAAGTC AGCTATGAAA TGCTCTATAT GGAAGTGGAT
TTGGATGAGC GTAAATTTCA GAAATTAGCG AAAAAGCAAC AAGAAATTGA TGCCAAAATT
CAGCATAGTG AAGAAGATGT GGCGAGATTT CAGCAACAGC AATTGGAAAA ATCCCTTTCC
GAGCCTGTTC AACGTATTGA GATGACCGAA ACAGAAAGTA CAAGTGCCAT TTCTCCAGTC
TCTGATGAGC ATGCTGAAAA TGTAGAAAAA AATGACCGCA CTTTCGTGGA AGATGTCAGC
ATCGATAATT TAGAGACCGA AACAGTAAAT GACATTATGA ATACTGTAAC AATCGATGAA
ATTTCTATTT CTGAACCAAC CCAAGATCTC GCCCGGCAAT TTGCTCAACA TTACGGTATT
ACGCCCGGAA TGAGCATTCA GGCTCAACGT GAGCAACAAG CCATTGCAAA TGGGTTGGAA
TTTGCTTGTG TTGGTCGTCA ACCTGTTTCA GATATTTGGC AAGTGTACCC AAGTCGTCAA
CATAAAGCAG AAGCTTATTC GCTTGCCTTA GATATTGCCG AGCAGTTTGG GATTGATGAA
CTCGTTGAAC ACGTTGTGAA CAATCCTGTC GATTACAGCT TTCAGATGAA AGCCGTAGAC
GGTTCTTTAA AAGACGACAC ACAACGTACC ATCTATGAAC TGCTCAGTAT GTTGCAAACA
CAGGATTTAA CCTATTCAGA AGCCTGTTTT CTTGATACGG CATTATTGTT AGGTTCGGCA
GATCGAGAAC CTAAAATTGA TGATGTTACC TTGGTGAAAT TATTTCGACT CATTCGTCTT
GTTCGCTATT TGCGAGCTTC AGCTTAA
 
Protein sequence
MNTKNKKLSD AVARNLNVTP MVNTSPSYVG ATATHYPTTS QYITVTLDKL RPYEHNPRKT 
RNPNFEMIKE SIRRRGLDHQ PNITQRPGEP FYIIADGGNT RIQALKELFS ETQDQRFWAI
ECLYKPWKGE TADSVEAELD LLIGHLIEND TRADLTFIEK ALGIQQAKEY YEKKLGHSLS
ARELSSELEK DGYIIHQTTL SKMERCVAYL YPYIPDVLFN GLGNSPIDKL LAIRNNALEV
WQQYQFETDI TFEAIWQNSL SRCNDDNPFN VKTFQDALIN EMTDAFEGKV SYEMLYMEVD
LDERKFQKLA KKQQEIDAKI QHSEEDVARF QQQQLEKSLS EPVQRIEMTE TESTSAISPV
SDEHAENVEK NDRTFVEDVS IDNLETETVN DIMNTVTIDE ISISEPTQDL ARQFAQHYGI
TPGMSIQAQR EQQAIANGLE FACVGRQPVS DIWQVYPSRQ HKAEAYSLAL DIAEQFGIDE
LVEHVVNNPV DYSFQMKAVD GSLKDDTQRT IYELLSMLQT QDLTYSEACF LDTALLLGSA
DREPKIDDVT LVKLFRLIRL VRYLRASA