Gene HS_1173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1173 
Symbol 
ID4240674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1324344 
End bp1325138 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content40% 
IMG OID638104736 
ProductABC transporter, ATP-binding protein 
Protein accessionYP_719385 
Protein GI113461316 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAGAC CTTTAATAGA AGTCAGAAAC CTAACTTTTA AGCGAGGTAA TCGAATTATT 
TATGACAATC TCAATTTGCA GGTACAGCAA GGCAAAATTA CTGCAATTAT GGGACCGTCA
GGCATTGGTA AAACCACGTT GCTAAAACTG ATTGGAGGAC AACTTCAACC TGAAAAAGGC
GAAATTTTGT TTGATGAGCA AGATATTTGT AAAATGTCCA ATAGTGAGTT ATATCGAGTT
CGTCAACGCA TAGGAATGTT ATTTCAGTCC GGCGCATTAT TTACCGATTT ATCAACTTTT
GATAATGTCG CTTTTCCTAT TCGAGAGCAT ACACATTTAC CGGAAAAACT TATTCGTCAA
ATTGTGTTGA TGAAATTGGA AGCTGTGGGG TTGCGTGGTG CGGCAAATTT AATGCCGTCG
GAATTGTCAG GCGGTATGGC AAGACGAGCC GCATTAGCTC GCACCATTGC ACTTGATCCG
GAGTTAATCA TGTACGATGA GCCTTTTGCA GGGCAAGATC CCATTAGTAT GGGAGTGATT
ATTAGCTTAA TTAAACGTTT AAATGAAGCG TTGCGATTAA CTTCAATTGT GGTTTCTCAT
GATGTGCAGG AAGTATTAAG TATTGCGGAT TATGCGTATA TTATTGCAGA TAAAAGAGTG
ATCGCTGAAG GAAGTGCGGA GCAACTTTTA CAAAGCCGAG ATCCGCAAGT TGTGCAATTT
ATTCAAGGTA AGGAAGATGG ACCTGTTCAC TTTCATTTTC CTGCACAAGA CTATGTACAG
GAGTTGTTTT CATGA
 
Protein sequence
MTRPLIEVRN LTFKRGNRII YDNLNLQVQQ GKITAIMGPS GIGKTTLLKL IGGQLQPEKG 
EILFDEQDIC KMSNSELYRV RQRIGMLFQS GALFTDLSTF DNVAFPIREH THLPEKLIRQ
IVLMKLEAVG LRGAANLMPS ELSGGMARRA ALARTIALDP ELIMYDEPFA GQDPISMGVI
ISLIKRLNEA LRLTSIVVSH DVQEVLSIAD YAYIIADKRV IAEGSAEQLL QSRDPQVVQF
IQGKEDGPVH FHFPAQDYVQ ELFS