Gene HS_1150 details

Gene Information

• Locus tag: HS_1150
• Symbol: cydC
• ID: 4240651
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haemophilus somnus 129PT
• Kingdom: Bacteria
• Replicon accession: NC_008309
• Strand: +
• Start bp: 1289298
• End bp: 1291028
• Gene Length: 1731 bp
• Protein Length: 576 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 638104713
• Product: cysteine/glutathione ABC transporter membrane/ATP-binding component
• Protein accession: YP_719362
• Protein GI: 161486692
• COG category: [C] Energy production and conversion; [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG4987] ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components
• TIGRFAM ID: [TIGR02868] thiol reductant ABC exporter, CydC subunit

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.91348
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGAGCTT TACTTCCTTT TCTTCGCTTA TTTTATCACG CTAAATTTAC TCTCATTTTA 
GGGGGAATAT TAATGATTGC GGGATTAGCC TCAAGCATCG GTTTATTAAC CCTATCCGGC 
TGGTTTCTCG CCGCCACGGC GTTAGCCGGT ATTGGCACAT TATTTAATTT TTTCTACCCG 
TCGGCAAGTG TCAGAGGTTT AGCAATCGGT CGAACTGTAA CACGTTATTT TGAAAAAATA 
GTGACGCATG ATGCCACTTT CCGTGTATTG GCAAAATTAC GTGTTCAAGT ATTCAGTAAA 
CTTATTCCTT TAAGCCCCGC AGTACTTAAT CGCTATCGCA ACAGTGATTT ACTTAATCGT 
TTAGTGGCTG ATGTAGATAC TTTAGATACA TTGTATTTAC GCCTTATTGC CCCTTTTATC 
AGTGCAATGA TTGTTATTGC TTTTATTACG TTAGGCTTAA GTTTATTCAA TGTTTCTATT 
GCATTATTTA TTGGTGTAAG TCTATTGCTG TTACTTGCCA TTATACCTAC CATTTTTTAT 
CAACTGGGAC GTAAATTCGG TGCTAAATTA ACCCAATCTC GTTCAGTTTA TCGCACTTAT 
TTTATCGAAT TTATTCAGTC GCAAGCGGAA CTATTACTCT TTAATGCAGC CTTTAACTCA 
AAAGAGAAAC TAAAAGCAAT CGAATTAGAA TGGCAATCTT ACCAACAACA AGAAACAAAT 
TTAGTCGGAT TATCTACCGC ACTTGTCGTA TTTATTAACG GATTACTGGT AGTAATAACC 
CTTTGGTTTG CGGCGAAAGC ACAATTTTCC ATTGCAGATT ATCACAATGC TTTTATTGCG 
TTATTTGCGT TTGCCGCTCT TGCCTCATTT GAGCTTCTCA TGCCTATTAG TGCCGCATTC 
TTACATATTG GACAAGTCAT TTCATCTGCA GAACGCATTA ATGAACTTCT TGCACAACGA 
CCTTTAGTGC AATTCAACGG TACTCACATA TTGCAAAACA ATGAATATCC GCTTATTCAA 
CTGAAAAATG TCAGTTTTTC TTATCCGGAT CGCAATGATC AGGCATTGCA ACAAATTAAT 
TTAACCGTTG AAGCTGGAAA AAAAGTGGCT GTTCTCGGGA AAACGGGGAG TGGCAAATCA 
AGTTTACTGC AATTATTGGT TCGAAACTAT GATTGCAACC AAGGGGAAAT TTTACTCTCT 
AATGCACCGA TTCAAGTTTA TACCGAAGAA ACGCTACGCC AAAATATCTG TTTACTCACT 
CAACGAGTAC ATATTTTTAG TGATACTTTA CGCAATAATT TACAAATAGC AGGTAGCCAA 
CAAATCAGCG ATGAAAAAAT GTGTCATATA CTACAAAAAG TAGGTTTGGA AAAATTAGTT 
CAGCAGGATC AAGGACTGGA TTTATGGTTA GGCGACGGCG GCCGACCTTT ATCAGGCGGT 
GAACAGCGTC GCTTAGGACT GGCAAGAGTT TTACTGAATA ATGCCCCCAT TATTCTACTT 
GATGAACCGA CAGAAGGACT GGATCGAGAT ACTGAACGCC ATGTTCTAAC GCTATTATTT 
GAACATTGTC AAAATAAAAC GTTCATTATG GTTACTCATC GTCTAACAGC ACTTGAACAA 
TTCGATTTAC TTTGTATCAT GGATAACAGC CATCTAGTTG AACAAGGACA TTACCATCAA 
CTGATTCAAC AAGAAAAAGG ATTTTTTAAA CAACTTATTG AACGAATTTA A 

 

Protein sequence

MRALLPFLRL FYHAKFTLIL GGILMIAGLA SSIGLLTLSG WFLAATALAG IGTLFNFFYP 
SASVRGLAIG RTVTRYFEKI VTHDATFRVL AKLRVQVFSK LIPLSPAVLN RYRNSDLLNR 
LVADVDTLDT LYLRLIAPFI SAMIVIAFIT LGLSLFNVSI ALFIGVSLLL LLAIIPTIFY 
QLGRKFGAKL TQSRSVYRTY FIEFIQSQAE LLLFNAAFNS KEKLKAIELE WQSYQQQETN 
LVGLSTALVV FINGLLVVIT LWFAAKAQFS IADYHNAFIA LFAFAALASF ELLMPISAAF 
LHIGQVISSA ERINELLAQR PLVQFNGTHI LQNNEYPLIQ LKNVSFSYPD RNDQALQQIN 
LTVEAGKKVA VLGKTGSGKS SLLQLLVRNY DCNQGEILLS NAPIQVYTEE TLRQNICLLT 
QRVHIFSDTL RNNLQIAGSQ QISDEKMCHI LQKVGLEKLV QQDQGLDLWL GDGGRPLSGG 
EQRRLGLARV LLNNAPIILL DEPTEGLDRD TERHVLTLLF EHCQNKTFIM VTHRLTALEQ 
FDLLCIMDNS HLVEQGHYHQ LIQQEKGFFK QLIERI