| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_1105 |
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| Symbol | hfq |
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| ID | 4240606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | - |
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| Start bp | 1241100 |
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| End bp | 1241390 |
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| Gene Length | 291 bp |
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| Protein Length | 96 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 638104668 |
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| Product | RNA-binding protein Hfq |
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| Protein accession | YP_719317 |
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| Protein GI | 113461248 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1923] Uncharacterized host factor I protein |
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| TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAAAAG GACAATCACT ACAAGATCCT TATTTAAACG CATTACGTCG TGAACGTATT
CCTGTATCAA TCTACTTAGT TAATGGCATC AAACTTCAGG GTCAAATCGA ATCTTTCGAC
CAATTTGTTA TTTTATTGAA AAATACAGTT AACCAAATGG TGTATAAACA CGCAATTTCA
ACAGTCGTTC CGGCTCGTTC AGTTTCTCAT CATAATAGTG TTCAGCATCA CCATATTGTT
CAAACTCAAG AAATGCAAGT GGAAGCATTA GCTGAAAATC AAACTGAATA A
|
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| Protein sequence | MAKGQSLQDP YLNALRRERI PVSIYLVNGI KLQGQIESFD QFVILLKNTV NQMVYKHAIS
TVVPARSVSH HNSVQHHHIV QTQEMQVEAL AENQTE
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