Gene HS_1046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1046 
Symbol 
ID4240544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand+ 
Start bp1153580 
End bp1154095 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content37% 
IMG OID638104607 
Productpermease 
Protein accessionYP_719258 
Protein GI113461189 
COG category[S] Function unknown 
COG ID[COG3247] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0496697 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAG ACAATAAAAT ACTCGGTGTA GTGCTAGGCA TAGGGCTTAT TTTAGTGGGG 
ATATTTATAT TAAACAGTCC CTTATTGACT TTATTGACAA TTATTTCGTA CCTTGCATGG 
GCAGTTTTGC TCAGGGGGTT ATTTTCCCTC TTTAAATGTT ATAAATCACA TAAAAATACC 
CAACCATTTG ATAAAACAGA ATTAGCCGCT GGCATCGTCT TAATGATTCT TGGCGTGATA 
TTCTTAACCA ACCCTTCATT TACCAATGCA CTTGTATTTT ATTTAGTCGC CTTTTGGTTT 
ATATTTGAGG GGATTGTCGG TATATATTAT GCCGCCAAAC AAAAAGATGT AGCAAAATGG 
GTAGGCATTG TGCTGGGGAT TTTTCTCGTA TTTTTTGGCT TATCCATTTC AGTAGAACCT 
CTCAGAGCTA TATTGGCACT CAATCTATTG CTGGGATTGG CAGTAGTAAC CAACGGGATT 
CAACTCCTAA CTGTTCAACT GATGAAAGAG AAATAG
 
Protein sequence
MKKDNKILGV VLGIGLILVG IFILNSPLLT LLTIISYLAW AVLLRGLFSL FKCYKSHKNT 
QPFDKTELAA GIVLMILGVI FLTNPSFTNA LVFYLVAFWF IFEGIVGIYY AAKQKDVAKW 
VGIVLGIFLV FFGLSISVEP LRAILALNLL LGLAVVTNGI QLLTVQLMKE K