Gene HS_0983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0983 
SymboluppS 
ID4240476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1083265 
End bp1083990 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content34% 
IMG OID638104539 
Productundecaprenyl pyrophosphate synthetase 
Protein accessionYP_719194 
Protein GI113461126 
COG category[I] Lipid transport and metabolism 
COG ID[COG0020] Undecaprenyl pyrophosphate synthase 
TIGRFAM ID[TIGR00055] undecaprenyl diphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.017531 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAAAA CAGCATTAAA TTTAAACAAT ATTCCTCAGC ATGTTGCGAT TATCATGGAT 
GGCAATGGAC GCTGGGCGAA ACAACAGGGA AAAATGCGTA TTTGGGGGCA TAAAAATGGG
ATTAAGGCTG TCCGAGAGTC GGTTTCTTAT GCTAGAAAAA TCGGAATTAA AGTTTTAACG
TTGTATGCCT TTAGCAGTGA AAATTGGAGC CGTCCTGAAA GTGAAGTAAG TGCTTTGATG
TCCTTATTTA TGCAAACACT GGATATTGAA GTTAAAAAAT TACATAAAAA TAACATTAAA
TTACAAATTA TTGGTGATGT TTCTCAATTT AATGAGCGTT TGCAAGAAAA AATCAAAAGA
GCAGAAAAAT TAACGGAAAA TAATACCGCA CTTACTTTAA ATATTGCTGC CAATTATGGT
GGTTGTTGGG ATATTGTTCA GGCGACATGT CAATTGGTAC AATTGGTAAA AGAAAATAAA
TTGCATATTG ATGAGATTGA TGAACAAATT TTTCAACATC ATCTAACAAC AGGTTCACAA
CCTCCAGTAG ATTTATTAAT TAGAACAAGT GGTGAGCAAC GAATTAGTAA TTTTTTATTA
TGGCAAATTG CTTATGCGGA ACTGTATTTT ACCGATACAT TGTGGCCTGA TTTTAATGAA
CAGGAATTTA ATCAAGCGAT ATTAGCTTAT CAACAACGTG AACGTCGTTT TGGCAGTTCG
GAATGA
 
Protein sequence
MTKTALNLNN IPQHVAIIMD GNGRWAKQQG KMRIWGHKNG IKAVRESVSY ARKIGIKVLT 
LYAFSSENWS RPESEVSALM SLFMQTLDIE VKKLHKNNIK LQIIGDVSQF NERLQEKIKR
AEKLTENNTA LTLNIAANYG GCWDIVQATC QLVQLVKENK LHIDEIDEQI FQHHLTTGSQ
PPVDLLIRTS GEQRISNFLL WQIAYAELYF TDTLWPDFNE QEFNQAILAY QQRERRFGSS
E